Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B1161 |
Symbol | fliD |
ID | 6792593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 1154474 |
End bp | 1155880 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642775423 |
Product | flagellar capping protein |
Protein accession | YP_002146064 |
Protein GI | 197250462 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.259033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTCAA TTTCATCATT AGGTGTAGGG TCAAACTTAC CTCTGGATTC ACTGCTGACT AAACTGACCA ACGCTGAAAA AGGACGCTTA ACGCCGATCA CACAGCAGCA GAGTGCTAAT ACGGCCCGTC TAACGGCATA CGGTACTTTA AAAAGTGCAC TGGAGAAGTT TCAAACAGCA AACACGGCGT TAAATAAAGC CGATCTGTTT AAAAGTACGA ATGTCACCAG CAGTACAGAA GACCTGAAAG TCTCGACGGA AGCTGGGGCC GCACCTGGAA CTTATGTGGT TAGCGTAACT CAGTTAGCAC AAGCACAATC TTTGAGTACA GCAACCAAAA TTACATCTAC CAAAGAAGTG CTGGGAGATA CCACATCTGA CAGCCGTACC ATAAAAATTG AACAGAAAGG CCGTAAAGAA CCACTTGAAA TCAAGCTCAC TAAAGATCAA ACCTCTTTAG AGGGTATCCG TGACGCCATT AATGATGCTG ACAGTGGTAT TTCCGCCAGT ATCGTTAAAG TTAAAGAAGG CGATTATCAG CTTGTACTGA CCGCAGATAG TGGCACGGAT AATCAAATGA CTATCTCTGT GGAAGGCGAT AGCAAACTCA GCGATCTGTT GTCCTATGAT AGTAGTACTG GCACGGGCAA AATGAAGCAA CTGGTTGCTG CAGATAATGC TTTGTTAACC GTTAACGGCA TTGATATTGA GCGACCGAGT AATAAAATCA CTGACGCTCC ACAAGGTGTG ACGCTTGAAC TAACCAAAGA AGTAAAAGAC GCCCGTATTA CTGTCACAAA AGATAATGAA AAGGCGACCG AAGCCGTCAA AGGTTGGGTT GATGCCTACA ACTCGCTGCT TGATACCTTT AGTTCATTAA CAAAATATAC AGAGGTTGAT CCAGGGGCTG AAGAACAGGA CAAAAACAAC GGTGCACTAC TTGGAGATAC CGTGGTGCGA ACGATTCAAA CTGGAATCCG CGCTCAGTTC GCTAATGGTG CAAGTACAGG TACATTTAAG ACCCTGAATG AAATTGGTAT TACTTCTGAT GGTACCACCG GAAAACTAAA AATTGATGAT ACCAAGCTTA AAAAAGCGCT GGATGAAAAT ACCGCTTCTG TACGTGAGCT GCTGGTAGGT GATGGTAAAG AAACGGGGAT CACCACCAAA ATTGCCACCG AAGTGAAAGG TTATCTGGCC GATGACGGCA TTATTGACAG CGCCCAGGAC AGTATTAACG CCACGCTGAA AAAACTGACT AAGCAATATC TGACCGTCAG CAGTAGCATT GACGACACCG TTGCCCGTTA CAAGGCCCAG TTTACCCAAC TGGATACCAT GATGAGTAAG CTGAATAACA CCAGTACTTA TTTGACCCAG CAATTTAATG CTATGAACAA GTCCTGA
|
Protein sequence | MASISSLGVG SNLPLDSLLT KLTNAEKGRL TPITQQQSAN TARLTAYGTL KSALEKFQTA NTALNKADLF KSTNVTSSTE DLKVSTEAGA APGTYVVSVT QLAQAQSLST ATKITSTKEV LGDTTSDSRT IKIEQKGRKE PLEIKLTKDQ TSLEGIRDAI NDADSGISAS IVKVKEGDYQ LVLTADSGTD NQMTISVEGD SKLSDLLSYD SSTGTGKMKQ LVAADNALLT VNGIDIERPS NKITDAPQGV TLELTKEVKD ARITVTKDNE KATEAVKGWV DAYNSLLDTF SSLTKYTEVD PGAEEQDKNN GALLGDTVVR TIQTGIRAQF ANGASTGTFK TLNEIGITSD GTTGKLKIDD TKLKKALDEN TASVRELLVG DGKETGITTK IATEVKGYLA DDGIIDSAQD SINATLKKLT KQYLTVSSSI DDTVARYKAQ FTQLDTMMSK LNNTSTYLTQ QFNAMNKS
|
| |