Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0935 |
Symbol | poxB |
ID | 6795723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 924129 |
End bp | 925847 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642775208 |
Product | pyruvate dehydrogenase |
Protein accession | YP_002145851 |
Protein GI | 197249558 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA CCGTTGCCGC TTTTATCGCC AAAACGCTGG AACAGGCTGG CGTAAAACGA ATCTGGGGCG TCACTGGCGA TTCCCTGAAC GGCCTGAGCG ATAGTCTTAA TCGTATGGGA ACCATTGAAT GGATGCCAAC CCGCCACGAA GAGGTCGCCG CTTTCGCCGC CGGCGCACAA GCGCAGCTTA CCGGCGAGCT GGCAGTGTGC GCCGGTTCAT GCGGACCGGG CAACCTGCAC CTGATCAATG GCCTGTTTGA TTGCCACCGT AACCACGTCC CTGTTCTGGC GATCGCCGCC CATATTCCGT CCAGTGAAAT CGGTAGCGGT TATTTCCAGG AGACCCACCC GCAGGAGTTG TTCCGTGAAT GCAGCCACTA TTGCGAGTTG GTTTCCAGCC CGGAGCAGAT CCCGCAGGTA CTCGCCATCG CCATGCGCAA AGCGGTGCTA AACCGCGGCG TCTCCGTGGT CGTACTGCCG GGTGATGTGG CGCTGAAACC CGCGCCTGAA AACGCCGTCA CTCATTGGTA CCATGCCCCG CACCCCGTCG TCACGCCGGC GGAGGAAGAG CTAAAAAAAC TGGCGCAACT GCTGCGCTAC TCCAGCAATA TCGCATTGAT GTGCGGCAGC GGCTGCGCGG GCGCGCATGA GGAGTTGGTC GCGTTGGCGG CAAAACTAAA AGCGCCAATC GTTCATGCCC TGCGCGGCAA AGAGCACGTT GAGTACGATA ACCCTTATGA TGTGGGAATG ACCGGCCTGA TTGGCTTCTC TTCTGGCTTC CACACCATGA TGAACGCCGA TACGCTGATC CTGCTCGGCA CCCAGTTCCC CTACCGCGCC TTTTATCCGA GCGATGCCAA AATCATTCAG ATTGACATCA ACCCGGGCAG TATTGGCGCG CACAGCAAAG TCGACATGGC GCTGGTGGGC GATATTAAAG CCACGCTTCG CGCCCTGCTG CCGCTGGTGG AAGAAAAAAG CAATCGTAAA TTCCTCGATA AAGCTCTGGA GCACTATCGG GACGCCCGTA AGGGACTTGA TGACTTAGCC AAACTCAGCG ATAAAGCCAT CCATCCACAA TATCTGGCGC AACAAATTAG CCATTTCGCC GCTGACGACG CTATTTTTAC CTGCGATGTC GGCACGCCGA CCGTCTGGGC GGCCCGCTAT CTAAAAATGA ACGGCAAGCG CCGCCTGCTG GGCTCGTTTA ACCACGGGTC AATGGCCAAC GCCATGCCGC AGGCGCTCGG CGCTCAGGCC ACCGCGCCGG GTCGGCAGGT TATCGCGATG TGCGGTGATG GCGGCTTCAG TATGCTGATG GGCGATTTTC TCTCGGTGGT ACAGATGAAG CTGCCGATAA AAATCGTCGT CTTTAATAAC AGCGTGCTGG GCTTTGTGGC GATGGAAATG AAAGCCGGCG GCTACCTTAC CGACGGTACC GAACTGCACG ACACCAATTT CGCGCGTATC GCCGAAGCCT GCGGCATTAC CGGTATTCGC GTGGAAAAAG CCGCAGACGT GGACGGAGCG CTACAGCGCG CGTTTTCCAT CGACGGCCCG GTACTGGTTG ACGTGGTCGT GGCAAAAGAA GAGCTGGCGA TCCCGCCGCA GATCAAACTG GAACAAGCGA AAGGCTTTAG CCTGTACATG CTACGCGCCA TTATTAGCGG CCGCGGCGAT GAAGTGATCG AACTGGCGAA AACAAACTGG CTAAGGTAA
|
Protein sequence | MKQTVAAFIA KTLEQAGVKR IWGVTGDSLN GLSDSLNRMG TIEWMPTRHE EVAAFAAGAQ AQLTGELAVC AGSCGPGNLH LINGLFDCHR NHVPVLAIAA HIPSSEIGSG YFQETHPQEL FRECSHYCEL VSSPEQIPQV LAIAMRKAVL NRGVSVVVLP GDVALKPAPE NAVTHWYHAP HPVVTPAEEE LKKLAQLLRY SSNIALMCGS GCAGAHEELV ALAAKLKAPI VHALRGKEHV EYDNPYDVGM TGLIGFSSGF HTMMNADTLI LLGTQFPYRA FYPSDAKIIQ IDINPGSIGA HSKVDMALVG DIKATLRALL PLVEEKSNRK FLDKALEHYR DARKGLDDLA KLSDKAIHPQ YLAQQISHFA ADDAIFTCDV GTPTVWAARY LKMNGKRRLL GSFNHGSMAN AMPQALGAQA TAPGRQVIAM CGDGGFSMLM GDFLSVVQMK LPIKIVVFNN SVLGFVAMEM KAGGYLTDGT ELHDTNFARI AEACGITGIR VEKAADVDGA LQRAFSIDGP VLVDVVVAKE ELAIPPQIKL EQAKGFSLYM LRAIISGRGD EVIELAKTNW LR
|
| |