| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0931 |
|---|
| Symbol | |
|---|
| ID | 6797126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 919709 |
|---|
| End bp | 920539 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642775204 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase AmiD |
|---|
| Protein accession | YP_002145847 |
|---|
| Protein GI | 197250448 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGC TACTGTGGCT GGTGGGTCTC GCGTTGCTGT TAACAGGCTG CGCGAGCGAA
AAAGGAATTA TCGATAAAGA GGGATATCAG CTTGATACCC GACATCGGGC GCAGGCGGCC
TATCCGCGCA TTAAAGTCCT GGTGATTCAC TATACGGCGG AAAACTTTGA CGTTTCGCTG
GCGACGTTAA CGGGTCGCAA CGTCAGTTCG CATTACCTGA TTCCCGCAAC CCCGCCATTA
TATGGCGGTA AACCGCGCAT CTGGCAACTG GTGCCGGAAC AGGATCAGGC CTGGCATGCG
GGCGTCAGTT TCTGGCGAGG CGCCACGCGT CTCAATGATA CGTCTATTGG CATTGAGCTG
GAAAATCGCG GTTGGCGAAT GTCCGGCGGG GTGAAATCTT TCGCGCCGTT TGAATCCGCG
CAAATTCAGG CATTGATTCC GTTAGCGAAG GACATTATCG CGCGCTATGA CATCAAACCG
CAGAATGTGG TGGCCCATGC GGATATCGCG CCGCAGCGTA AAGACGATCC CGGCCCGCGC
TTCCCGTGGC GCGAGCTGGC GGCGCAGGGG ATTGGCGCCT GGCCTGACGC CCAGCGTGTG
GCGTTTTATC TGGCTGGACG CGCGCCGTAT ACGCCAGTCG ATACCGCAAC GGTGCTTGCG
TTACTCTCGC GCTATGGCTA TGAAGTCAAA GCCGATATGA CGGCACGCGA GCAGCAGCGG
GTGATTATGG CGTTCCAGAT GCACTTCCGT CCGGCGCAAT GGAACGGTAT CGCAGATGCC
GAAACGCAGG CGATTGCCGA AGCATTACTG GAGAAGTACG GCCAGGATTA A
|
|---|
| Protein sequence | MRALLWLVGL ALLLTGCASE KGIIDKEGYQ LDTRHRAQAA YPRIKVLVIH YTAENFDVSL
ATLTGRNVSS HYLIPATPPL YGGKPRIWQL VPEQDQAWHA GVSFWRGATR LNDTSIGIEL
ENRGWRMSGG VKSFAPFESA QIQALIPLAK DIIARYDIKP QNVVAHADIA PQRKDDPGPR
FPWRELAAQG IGAWPDAQRV AFYLAGRAPY TPVDTATVLA LLSRYGYEVK ADMTAREQQR
VIMAFQMHFR PAQWNGIADA ETQAIAEALL EKYGQD
|
|---|
| |