Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B0767 |
Symbol | sdhA |
ID | 6794824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 762833 |
End bp | 764599 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642775044 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002145692 |
Protein GI | 197249553 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTGC CAGTCAGAGA ATTTGATGCT GTTGTGATTG GTGCCGGTGG CGCAGGTATG CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAAACCTGTG CGCTGCTCTC GAAAGTCTTC CCGACCCGTT CCCATACCGT TTCCGCGCAG GGCGGTATTA CCGTGGCGCT CGGCAATACC CATGAAGATA ACTGGGAATG GCACATGTAC GATACCGTAA AAGGGTCGGA CTACATTGGT GACCAGGATG CCATCGAGTA TATGTGTAAG ACCGGACCGG AAGCGATTCT GGAACTGGAG CACATGGGGC TACCGTTCTC CCGTCTTGAT GATGGACGTA TCTATCAGCG CCCGTTCGGC GGCCAGTCGA AAAACTTTGG CGGCGAGCAG GCGGCACGTA CCGCGGCGGC GGCTGACCGT ACCGGTCACG CCTTGCTGCA CACGCTGTAT CAACAGAATT TGAAAAACCA CACCACGATT TTCTCCGAAT GGTATGCGCT GGATCTGGTG AAAAACCAGG ATGGCGCGGT GGTGGGGTGT ACCGCACTGT GCATCGAAAC CGGTGAAGTG GTGTACTTCA AAGCCCGCGC GACGGTGCTG GCGACCGGCG GCGCAGGCCG TATCTACCAG TCCACCACCA ACGCTCACAT CAACACCGGT GATGGTGTCG GTATGGCGCT GCGTGCCGGT GTCCCGGTGC AGGACATGGA AATGTGGCAG TTCCACCCGA CCGGCATCGC CGGGGCGGGC GTGCTGGTGA CAGAAGGCTG CCGCGGCGAA GGCGGTTACC TGCTGAACAA ACACGGCGAG CGCTTTATGG AGCGTTATGC GCCGAACGCC AAAGACCTGG CGGGTCGTGA CGTGGTGGCG CGTTCCATCA TGATCGAAAT CCGTGAAGGC CGCGGCTGCG ATGGTCCGTG GGGGCCGCAC GCTAAACTGA AACTGGATCA CCTGGGTAAA GAGGTGCTGG AATCTCGCCT GCCGGGTATC CTGGAGCTGT CCCGCACTTT CGCTCACGTT GACCCGGTGA AAGAGCCGAT TCCGGTTATC CCGACCTGCC ACTACATGAT GGGCGGTATT CCGACTAAAG TGACCGGTCA GGCGCTGACC GTGAACGAGC AGGGCGAAGA CGTGGTCATT CCGGGGCTGT TTGCGGTAGG CGAAATCGCC TGTGTATCGG TTCACGGCGC CAACCGTCTG GGCGGTAACT CACTGCTGGA TCTGGTGGTC TTTGGCCGCG CGGCGGGGCT GCATTTACAG GAATCCATCG CCGAGCAGGG CGTGCTGCGC GACGCCAGCG AGTCTGACGT TGAAGGTTCT CTGGAGCGCC TGAATCGCTG GAACAATAAC CGCAATGGTG AAGATCCGGT GGCTATCCGC AAAGCGTTGC AGGAGTGTAT GCAGCATAAC TTCTCCGTAT TCCGTGAAGG TGACGCGATG GCGAAAGGGC TTGAGCAGTT GAAAGTGATC CGCGAGCGTC TGAAAAACGC CCGTCTGGAT GACACGTCCA GCGAGTTTAA TACCCAGCGT GTTGAGTGTC TGGAGCTGGA TAACCTGATG GAAACCGCCT ACGCCACTGC CGTATCAGCC AACTTCCGAA CGGAAAGCCG CGGCGCGCAT AGCCGCTTCG ATTTCCCGGA GCGTGATGAT GCCAACTGGT TGTGTCATAC CCTGTATCAG CCGCAAACGG AATCCATGAC GCGCCGAAGC GTCAATATGG AGCCGAAACT GCGTCCGGCG TTCCCGCCGA AGATTCGTAC TTATTAA
|
Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC TALCIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMALRAG VPVQDMEMWQ FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI PTKVTGQALT VNEQGEDVVI PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ ESIAEQGVLR DASESDVEGS LERLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH SRFDFPERDD ANWLCHTLYQ PQTESMTRRS VNMEPKLRPA FPPKIRTY
|
| |