| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0173 |
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| Symbol | pdhR |
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| ID | 6795894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 178617 |
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| End bp | 179381 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642774476 |
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| Product | transcriptional regulator PdhR |
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| Protein accession | YP_002145140 |
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| Protein GI | 197249231 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0149565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCTACA GCAAAATCCG CCAACCAAAA CTCTCCGATG TGATCGAGCA GCAGCTGGAG
TTTTTAATCC TTGAGGGAAC ATTGCGTCCC GGAGAAAAAC TCCCACCGGA ACGTGAACTG
GCAAAACAGT TCGACGTCTC CCGTCCCTCC TTGCGCGAGG CGATTCAACG TCTCGAAGCG
AAGGGATTGT TGCTTCGTCG CCAGGGCGGC GGAACCTTCG TGCAGAGCAG CCTGTGGCAG
AGCTTTAGCG ACCCGCTGGT GGAACTGCTC TCCGATCACC CTGAATCCCA GTTTGACCTG
CTCGAAACGC GCCATGCGCT GGAAGGCATT GCGGCTTATT ACGCGGCGCT GCGCAGCACC
GACGAAGATA AAGACCGTAT TCGCGAGCTG CACCATGCCA TTGAGCTGGC GCAAGAGTCC
GGCGATCTGG ATGCCGAGTC CGAAGCCGTG CTCCAGTATC AAATCGCCGT CACCGAAGCG
GCGCACAACG TGGTATTGCT TCATCTGCTA AGGTGTATGG AGCCGATGCT GGCGCAAAAC
GTGCGGCAGA ACTTCGAATT GCTGTATGCG CGTCGGGAGA TGCTGCCGCT GGTGAGTACG
CATCGCACCC GTATATTTGA AGCCATTATG GCCGGAAAAC CAGAAGAAGC GCGTGAAGCG
TCACACCGCC ATCTGGCGTT TATCGAAGAG ATTATGTTGG ACAGAAGCCG TGAGGAGAGC
CGTCGTGAAC GCGCTTTACG CCGTCTGGAG CAGCGCAAGA ATTAG
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| Protein sequence | MAYSKIRQPK LSDVIEQQLE FLILEGTLRP GEKLPPEREL AKQFDVSRPS LREAIQRLEA
KGLLLRRQGG GTFVQSSLWQ SFSDPLVELL SDHPESQFDL LETRHALEGI AAYYAALRST
DEDKDRIREL HHAIELAQES GDLDAESEAV LQYQIAVTEA AHNVVLLHLL RCMEPMLAQN
VRQNFELLYA RREMLPLVST HRTRIFEAIM AGKPEEAREA SHRHLAFIEE IMLDRSREES
RRERALRRLE QRKN
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