| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B0088 |
|---|
| Symbol | |
|---|
| ID | 6794500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 91925 |
|---|
| End bp | 93331 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642774399 |
|---|
| Product | putative metabolite transport protein YaaU |
|---|
| Protein accession | YP_002145063 |
|---|
| Protein GI | 197249355 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGG AAACGCCTTA TCCGGCCTAC AGATGCGCTT TGCCCGTGTT GACACAGGAC
ATCACCATGC AGCAGCCCAG GAACTTTGAT GACCTTAAAT TCTCCTCCAT TCATCGCAGA
ATTATGCTGT GGGGAAGCGG CGGCCCGTTC CTTGATGGCT ACGTGCTGGT GATCATTGGC
GTGGCGCTGG AACAACTGAC GCCGCTATTG CACCTTGATG CTGAATGGAT TGGCGCGCTC
GGCGCGGCTA CGCTTGCCGG ACTGTTTATC GGCACCTCGT TGTTTGGCTA TATTTGCGAT
AAAGTCGGGC GGCGTAAAAT GTTCCTGCTT GATATTATCG CTATCGGCGT TATCTCCGTG
GCGACCATGT TTGTTTCCAC GCCGCTTGAA TTGCTGGTGA TGCGCGTTTT AATTGGCATT
GTTATCGGCG CGGATTACCC TATCGCTACT TCCATGATTA CGGAGTTTTC CAACACCCGC
CAGCGCGCGT TCTCCATCGG TTTTATCGCC GCGATGTGGT ACGTCGGCGC GACCTGCGCC
AACCTGGTGG GTTACTGGCT GTATGACATG GAAGGCGGCT GGCGCTGGAT GCTTGGCAGC
GCCTTTATCC CGTGCTTAAT CATTTTGATT GGCCGCTTTG ACCTGCCGGA ATCGCCACGC
TGGCTATTGC GAAAAGGACG GGTAAAAGAG TGCGAACAAA TGATGATCAA ACTGTTCGGC
GAACCGGTCT GCTTTGACGA TGAGCCGCCG CAGGAGACCC GCTTCCTGCA GCTGTTTAAC
CGCCGTCATT TCCCGTTTGT ACTGTTCGTT GCGGCTATCT GGACCTGTCA GGTGATCCCG
ATGTTCGCTA TCTATACCTT TGGGCCGCAG ATCGTCGGGT TACTCGGCTG GGAGCAGGGG
CGCAACGCGG CGCTCGGCAA TGTGGTCATT AGCCTCTTTT TTATGCTGGG CTGTATACCG
GCGATGTTCT GGCTAAACAG TATTGGCCGT CGCCCTCTGC TTATTGGCAG CTTCGCCATG
ATGACTATCG CGCTGGCGCT GCTGGGGCTG GTGTCAAATC TGGGCATCAT ACTGGTCGTG
GTGGCGTTTG CGGTATACGC CTTCTTTTCC GGCGGACCGG GCATACTGCA ATGGCTTTAT
CCTAATGAAC TCTTCCCGAC GGATATTCGC GCTTCGGCCG TGGGGGTCAT CATGTCATTA
AGCCGCATCG GAACCATTGT CTCCACCTGG GCATTACCGA TTTTTATTAC TCGTTACGGT
ATTAATAACG TCATGCTGAT TGGCGCGTTG ATTTCGTTAG TCGGGCTTGG CGTATCGGTG
ATGTTTGCCC CGGAAACTCG CGGCTTGACG CTAACACAGA CCGGAAACAT GACTTTGCGC
GGAACGCCAT CGGATAACCC GCGTTAA
|
|---|
| Protein sequence | MAAETPYPAY RCALPVLTQD ITMQQPRNFD DLKFSSIHRR IMLWGSGGPF LDGYVLVIIG
VALEQLTPLL HLDAEWIGAL GAATLAGLFI GTSLFGYICD KVGRRKMFLL DIIAIGVISV
ATMFVSTPLE LLVMRVLIGI VIGADYPIAT SMITEFSNTR QRAFSIGFIA AMWYVGATCA
NLVGYWLYDM EGGWRWMLGS AFIPCLIILI GRFDLPESPR WLLRKGRVKE CEQMMIKLFG
EPVCFDDEPP QETRFLQLFN RRHFPFVLFV AAIWTCQVIP MFAIYTFGPQ IVGLLGWEQG
RNAALGNVVI SLFFMLGCIP AMFWLNSIGR RPLLIGSFAM MTIALALLGL VSNLGIILVV
VAFAVYAFFS GGPGILQWLY PNELFPTDIR ASAVGVIMSL SRIGTIVSTW ALPIFITRYG
INNVMLIGAL ISLVGLGVSV MFAPETRGLT LTQTGNMTLR GTPSDNPR
|
|---|
| |