Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_R0016 |
Symbol | |
ID | 4016687 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 410634 |
End bp | 413538 |
Gene Length | 2905 bp |
Protein Length | |
Translation table | |
GC content | 51% |
IMG OID | 640713865 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.427778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GGTTAAGTGA CCAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT GGGGAAACCC GGCCACACAA GTGGTCATCA TAACGTGAAT ACATAGCGTG ATGAGGCGAA CCTGGGGAAC TGAAACATCT AAGTACCCAG AGGAAAAGAA ATCAACCGAG ATTCCCCTAG TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCTATGGG GTGTTAGTGG AATGGTCTGG AAAGTCCAGC GGCACAGGGT GATAGCCCCG TACACGAAAA CTAACCGTAG ATGAAAACGA GTAAGGCGGG ACACGTGACA TCCTGTTTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTTCTTGAGA CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CATTTTGTAG CGAGGTTAAG CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGTGTAGA CCCGAAACCG AGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT CAAACTCGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GAGCGAATAC CATTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA ACTCCGAATA CCAATGAGTA CTACTCGGGA GACAGACAGC GGGTGCTAAC GTCCGTTGTC AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TACTAGCTAA GTGGGAAACG ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAGCTAGTCA CCGAAGCTAC GGGTGCATTT CATTAGAAGT GCGCGGTAGA GGAGCGTTCT GTAAGCCGTT GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GATAAAGGGG GTGAAAAACC CCCTCGCCGG AAGACCAAGG GTTCCTGTCC AACGTTAATC GGGGCAGGGT GAGTCGACCC CTAAGGTGAG GCCGAAAGGC GTAATCGATG GGAAACAGAT TAATATTTCT GTACTTCTGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG CGTTGGTAGT CCGCGTTTAA GGTGGTAGGT TGAATTCTTA GGCAAATCCG GGAATTCGTA CTTTAATGTA CAGGCTGAGA GCTGATGACG AGTCACTAAG GTGATGAAGT AGTTGATGCC ATGCTTCCAG GAAAATCTTC TAAGCTTCAG GTTAGTAGGA ATCGTACCCC AAACCGACAC AGGTGGTCGG GTAGAGAATA CCAAGGCGCT TGAGAGAACT CGGCTGAAGG AACTAGGCAA AATGGTACCG TAACTTCGGG AGAAGGTACG CTGCTGTTGG TGATGGGACT TGCTCCCTAA GCTGACGGCA GTCGCAGATA CCAGGTGGCT GCAACTGTTT ATCAAAAACA CAGCACTGTG CAAAATCGCA AGATGACGTA TACGGTGTGA CGCCTGCCCG GTGCCGGAAG GTTAATTGAT TGGGTTATCT TCGGAGAAGC TCATGATCGA AGCCCCGGTA AACGGCGGCC GTAACTATAA CGGTCCTAAG GTAGCGAAAT TCCTTGTCGG GTAAGTTCCG ACCTGCACGA ATGGCGTAAT GATGGCCACG CTGTCTCCAG CCGAGACTCA GTGAAGTTGA AATTGCGGTG AAGATGCCGT ATACCCGCGG CTAGACGGAA AGACCCCGTG AACCTTTACT ATAGCTTGGC ACTGAACATT GAACCTACAT GTGTAGGATA GGTGGGAGAC TTTGAAGCAT GAACGCTAGT TTGTGTGGAG TCGTCCTTGA AATACCACCC TTGTAGTTTT GATGTTCTAA CCTGGACCCC TTATCGGGGT TAGGGACAGT GCCTGGTGGG TAGTTTGACT GGGGCGGTCT CCTCCCAAAG AGTAACGGAG GAGCACGAAG GTTGGCTAAG TACGGTCGGA CATCGTACGG TTAGTGCAAT GGCATAAGCC AGCTTAACTG CGAGACATAC ACGTCGAGCA GGTACGAAAG TAGGTCATAG TGATCCGGTG GTTCTGAATG GAAGGGCCAT CGCTCAACGG ATAAAAGGTA CTCCGGGGAT AACAGGCTGA TACCGCCCAA GAGTTCATAT CGACGGCGGT GTTTGGCACC TCGATGTCGG CTCATCACAT CCTGGGGCTG AAGTCGGTCC CAAGGGTATG GCTGTTCGCC ATTTAAAGTG GTACGCGAGC TGGGTTCAGA ACGTCGTGAG ACAGTTCGGT CCCTATCTGC CGTGGGCGTT GGATGATTGA AGGGAGCTGC TCCTAGTACG AGAGGACCGG AGTGGACGAA CCGCTGGTGT TCGGGTTGTC ATGCCAATGG CATTGCCCGG TAGCTACGTT CGGAATCGAT AACCGCTGAA AGCATCTAAG CGGGAAGCGA GCCCTAAGAT GAGTCATCCC TAGAGCTTTA AGCTCTCTAA AGGGCCGTAG GAGACTACTA CGTTGATAGG CAAGGTGTGT AAGCGTTGTG AGGCGTTGAG CTAACTTGTA CTAATGACCC GTGAGGCTTA ACCAT
|
Protein sequence | |
| |