| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3768 |
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| Symbol | |
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| ID | 4020330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4535444 |
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| End bp | 4536316 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957832 |
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| Product | LysR, substrate-binding |
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| Protein accession | YP_564764 |
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| Protein GI | 91795113 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAGT GGGAGGGCAT ATCTGAATTT GTCGCTGTGG CTGAAACTGA GAGTTTTACC
GCTGCGGGAA AAAGACTCAG TATTTCTACA GCACAGGTGA GTCGTCAAGT CAGCCAGCTT
GAAGATCGTT TAAGCACTAA GTTGTTTTAT CGCACCACCC GCAAAGTGGC CCTAACAGAA
GAAGGCGCTG TTTATTATCG ACATTGTCGT CAGGTGCTCA ATGGTTTGGA TGATGCAGAG
CGCGCCATAT CAAGCCTTAA GGATAAACCT CAAGGCCTTA TCAAGATGAC GGCACCAGTC
ACCTATGGTG AGACGCATAT TATGCCGATA GTGATTGCTT TTATGGCCCA ATACCCACAA
GTCGAAGTGC AATGTGAGCT GACCAATCAA AGGCTAGATC TTATCGATGG TGGGTTTGAT
TTAGCCATTC GTCTAGGGCA ATTGGGGGAT TCGAGCATGA TGGCCAAGCG CCTCAGTAGC
CGGCGTCAAT ACGTGTGCGC TGCACCTAGC TACATAGCAA CCTATGGCGC CCCATATAGC
TTGTCTGAAT TGAGCCAACA TAATTGCCTG ATAGGCAGCC AGTCTCAATG GCAATTTATC
GAACAGGGCA AGGTGAAGAA TATAAAAGTG CAGGGTAGTT TGCACTGCAG CAGTGGTTTT
AGCTTACTGG ATGCCGCTAT TCGGGGGCTT GGGATAGTGC AATTACCGGA TTACTACGTT
AGCCAAGCAC TGACTGAAGG TAAGCTTATG GTATTACTCG AGCCTTTTCA GCAATCTAAA
GAAGGGATAT GGGCTCTGTA TCCTCACAAT CGCCACCTTT CGCCTAAGGT GCGTTTACTG
GTGGATAAGC TGGCCGATGA GTTGGCTGAG TGA
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| Protein sequence | MMQWEGISEF VAVAETESFT AAGKRLSIST AQVSRQVSQL EDRLSTKLFY RTTRKVALTE
EGAVYYRHCR QVLNGLDDAE RAISSLKDKP QGLIKMTAPV TYGETHIMPI VIAFMAQYPQ
VEVQCELTNQ RLDLIDGGFD LAIRLGQLGD SSMMAKRLSS RRQYVCAAPS YIATYGAPYS
LSELSQHNCL IGSQSQWQFI EQGKVKNIKV QGSLHCSSGF SLLDAAIRGL GIVQLPDYYV
SQALTEGKLM VLLEPFQQSK EGIWALYPHN RHLSPKVRLL VDKLADELAE
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