Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3760 |
Symbol | |
ID | 4020322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4526991 |
End bp | 4527875 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957824 |
Product | parB-like partition proteins |
Protein accession | YP_564756 |
Protein GI | 91795105 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0200998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAA AAAAACGCGG TTTAGGCAAA GGTTTAGACG CATTACTCAG CCACAGCAAT GCGGCGAGTC GTAAAACAGA ACAACAAGAA CAAGCCAACA CTGACGCTAT GGATGGCAAG CTTATCGAGT TAGATTTGGA TTTACTGCAG CCTGGTAAGT ATCAGCCACG CCGCGATATG TCGCCCGAAG CCCTAGAAGA GCTTGCTGAG TCAATTCGCT CTCAGGGGGT TATCCAGCCA ATCGTGGTGC GTCAGGTCGG TAGCGGTCAA TATGAGATTA TTGCCGGTGA ACGTCGCTGG CGTGCAGCGC AATTGGCCCA ATTAAATAAA ATTCCTTGTT TGGTTAAGCA AGTCGCCGAT GAGGCTGCTG TCGCTATCGC CCTGATTGAG AATATCCAGC GTGAAGATCT TAATGCCATG GAAGAAGCCG TGGCATTAAA TCGACTGCTG GAAGAATTTG AGCTCACTCA TCAACAAGTG GCCGACGCCG TGGGTAAATC ACGGGCAAGT GTCTCTAACT TGCTGCGTTT GAACAGCTTA AACGAGCCGG TAAAGCGTTT GTTGGAGAAC GGTGATATAG ACATGGGCCA TGCTCGTGCT TTATTGGCCA TAGAAGGTGA TGAGCAAACT GAACTGGCCC GTTTAGTGGC GTCGAAGGAA ATGACTGTTC GCGAAACCGA ACGTTTAGTC AATAAAGCCC TTTTGCCGGC AAAAACGGCA GAATCTAAAG AAAAAGATCA TGATGTTAGT CGTCTAGAGC AAAGCTTAGT TGAGCGATTA GGCGCTAAAG TGTCTATCAA TCATAGCGCT AAAGGAACGG GTAAGATTGT TATCAATTAT CAAAACTTAG GCGAACTCGA TGGCATTCTT GCCAAAATAG GTTAA
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Protein sequence | MTLKKRGLGK GLDALLSHSN AASRKTEQQE QANTDAMDGK LIELDLDLLQ PGKYQPRRDM SPEALEELAE SIRSQGVIQP IVVRQVGSGQ YEIIAGERRW RAAQLAQLNK IPCLVKQVAD EAAVAIALIE NIQREDLNAM EEAVALNRLL EEFELTHQQV ADAVGKSRAS VSNLLRLNSL NEPVKRLLEN GDIDMGHARA LLAIEGDEQT ELARLVASKE MTVRETERLV NKALLPAKTA ESKEKDHDVS RLEQSLVERL GAKVSINHSA KGTGKIVINY QNLGELDGIL AKIG
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