Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3746 |
Symbol | |
ID | 4020308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4512218 |
End bp | 4513081 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957810 |
Product | Pirin-like protein |
Protein accession | YP_564742 |
Protein GI | 91795091 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TACTAGGCAT TTATTCACCC TCATCTCCCC ATTGGGTGGG TGATGGTTTT CCAGTGAAAA CCCTCTTTTC CTATGATGTG TTTGGCGAGC AAATCAGTCC ATTTTTGCTG CTCGATCATG CTGGACCGAT GAATTTCTCG CCGTCTTCTA AAAAACGTGG CGTAGGCGTT CATCCACACC GTGGCTTTGA GACTGTGACC TTAGTTTATC AAGGCGGTGT GGCTCACAAG GACTCTTCAG GACAAGGTGG CGTCATTGGC CCAGGTGATG TTCAGTGGAT GACGGCGGGT AGCGGGATTT TACATGAGGA ATATCACTCT GATGAATTTG CTCAAAGCGG TGGCCAGATG GAAATGGTGC AGCTTTGGGT GAACTTACCT AAGACTCATA AGATGACGGC ACCAAAATAT CAGGCCATTA CGACAGAGCA AATACCTCAA ATCAGCATAC TGGAAGGTAA AGGGAAAATT CGTTTGATTG CCGGCGAGCT ATTTGGACAG CAAGGGCCCA CGAGCACTCA TACCCCTATG ATGGTGTTAG ACATGTCTTT GACTTCGGGC AGTAAATATC TTTTACCTGT GGCGCAAGCT TGGTCTGGGA TAGTCATGCT GCGAAAAGGC CAGGCCAATA TTAATGGTCA ATTGGTGACA GAGGGACAGA CGATGATCTT GTCCCATGAT GGTCAAGATA TTGAAATAGA GAGCCCAGAT GCCAGTGAGT TAGTGATCTT AAGTGGTCAG CCCCTAGGGG AACCTATTTT TGGCTACGGT CCTTTTGTGA TGAACAGTCA GACAGAAATA GACGCAGCGA TAAAAGATTT CCAACAAGGA AAGTTTGGCG ATATCGAGCG CTAA
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Protein sequence | MKKVLGIYSP SSPHWVGDGF PVKTLFSYDV FGEQISPFLL LDHAGPMNFS PSSKKRGVGV HPHRGFETVT LVYQGGVAHK DSSGQGGVIG PGDVQWMTAG SGILHEEYHS DEFAQSGGQM EMVQLWVNLP KTHKMTAPKY QAITTEQIPQ ISILEGKGKI RLIAGELFGQ QGPTSTHTPM MVLDMSLTSG SKYLLPVAQA WSGIVMLRKG QANINGQLVT EGQTMILSHD GQDIEIESPD ASELVILSGQ PLGEPIFGYG PFVMNSQTEI DAAIKDFQQG KFGDIER
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