Gene Sden_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3742 
Symbol 
ID4020304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp4507521 
End bp4508126 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID637957806 
Productnegative transcriptional regulator 
Protein accessionYP_564738 
Protein GI91795087 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACACCT ATGTACCTAA GAGTTTTAGT ACGGAATGCT CAGAAACGCT TCGCAACTTG 
GTGTTGCAAA ACAGTTTTGC CACTTTAATC ACAGTCGATA ACGACGGTGA ACTCCATCTC 
TCTCATTTGC CAGTTATCCT GGAACAAAGT GACCATCAGT GGCGCTTTTC CTTTCATTTG 
GCCGTAAGTA ATCGTCACAG CCAAGTGTTG GCTGACTCCG CAAAGAGCGT GCTGATTTTT 
AAGGGGCCAC ATGCCTATAT CAGTCCGACT TGGTATCAGA AGCAGTCGGG GGTACCAACA 
TGGAACTATG CTATAGCTCA TTTCGAAGGT CGTGTTAGAC CACTGGATGC AGGAGATTTG 
CTGGGACATT TGAGACAGCA AGTGCACTTA TATGAACCAC AACTGAACGG CAGCGAAGTC 
ATGCCTGATG AATTGGTCGA TAGGTTGAGC GGTATGATTA GTGGTTTCGA ATTGACCGCA 
GACCAAGTTC TGAGCAAATT CAAGTTGGGT CAAAACCGCT CTGCCGAAGA TCAGGCTGGT 
ATTTTTGAAG CTTTGAGAAA CAGTGATAAA CCACAAGCCA GGGCACTGGC CAAGCTGATG 
GAATAG
 
Protein sequence
MYTYVPKSFS TECSETLRNL VLQNSFATLI TVDNDGELHL SHLPVILEQS DHQWRFSFHL 
AVSNRHSQVL ADSAKSVLIF KGPHAYISPT WYQKQSGVPT WNYAIAHFEG RVRPLDAGDL 
LGHLRQQVHL YEPQLNGSEV MPDELVDRLS GMISGFELTA DQVLSKFKLG QNRSAEDQAG 
IFEALRNSDK PQARALAKLM E