| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3733 |
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| Symbol | |
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| ID | 4020295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4489805 |
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| End bp | 4496941 |
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| Gene Length | 7137 bp |
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| Protein Length | 2378 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957797 |
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| Product | amino acid adenylation |
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| Protein accession | YP_564729 |
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| Protein GI | 91795078 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGATA GCCTGTATAA GGCAGCAGAC TTATTGCAAC ATTGTGCCGA GCAAGGCATG
GCTTTGAGTC TGAATGGGCA AGGTGGCCTA TCGTTTCAGC ATTATGGTCA AGGTGATAGT
ACACCTTTGT TGGTTCAGGT TAAAGCGTTG AAATCTGAGC TTGTCGACTA TTTTCACTTA
CTTGGAACGG CACCACAACG AGTACCTATA AGAGCCGATG TACAGCAATT GTTACTTTAC
CGTCAACAAA TCGCTGAGCA AAATTCTGCG TTTAATATCG CCCTGCAATT TGAATTAGTT
GGTGAGTTGG ACTTTAGTGA CTTTAAAGTT TGGGCCGAAA CTTTAGTGCA ACGTCACACT
CGGTTACAAA GTCGCTTTGT TATGCATAAG GGGAAACTTT ATGCTCAATT TGACCCCTTT
GTTGCAGTCG TTGTCGGCCA TCATAGACAA CAAGCGAATC TTGACGCATT TAGGACGGCT
CCGTTTGACT TGCAAAACGG TCCGTTATAT CGCTTCGATT GGGTAGAAAC CGCAGATAAT
AAGCGTTTTG TGTCGCTAGT CTTTCATCAT TTGGTATTTG ATGGTCACTC ACTGCAATTA
TTGGTTAAAG ATGTTCGTCA GTACCTTTGT CAAAACGTAG CAAGTCTAAA TTTAATACCT
GCAACAGCAT CTTGGCTACC CCAGGTCCAC TCAAATCAGG TGGATATGGC GACCTATGTT
GAGCATATCA ATGGCTTTGA AACGCTTGAT TGGCAACAGA CTTTTGGAGG TAGCAGCAAC
GGCTCTGGTA TGGCGCTACT TCATCGTGAA TATTTAAGCG CATCCCATTT TGCACAGCTC
AACAGATTAG CGCAAAAGCA TCAGATGAGT CCGTTTGCGC TGCAGAGCGC TATCACGGCG
CTAGTTATCG GTATTTATAG CGACAGTCGT CGATTTTTAT TGTTCACTCC TGCCGATCGA
CGCACTTCCG AGCAGCATGA GTATATTGGC CATTTTGTAC AAATGTTGGC GATCCAGTGT
GAGTTGAAAC TTGGTGGCGA AGTTGCAGAT TATCTGTCAG CCAGTCGTGA TGCCTTTATG
CAGGCGCAGG CGCATACGGC GTTAAGCTAT GACAATGCTA ACCGCTGGTG TTTAAGCCAA
AATCACGGTG CATTACCTCC TATTAAAGCT GTCATTGTTC AGCAAACTCT ACCTCAATCG
GTCATAGAGT TGGCTGGTGG CAAAGCTCAA CTCCATTTTC TTGCCGCTGA AACTAGGGCT
GTGAAATATC CTTTAATGCT GAATTGTCAA AGCGATGGTC GGCAGCTGCA ATTGGAATGG
GAATACGATA GTTCACTGTT TAGTGAACAA CATATCCGAC AAATGCAGCA GCATTGGTTG
ATGATATTGG AGTTGTTGGA TAGTGGAGGT GCTTGTTTAT TTGATCAGTT GAGTAAGACA
TTATTGGCTA AGTACCATCA TGCCCCTCTT AATCGACTCA AAGGGTCGAC AGCATCTGTT
CAGGCCCACT GGCGTAATCG GACCATCACT GATATTTGGC AGCATAGTGT TGCGCAATTT
GCTGATCGCA AGGCCGCCGG GTTTGGCGAC AACTGGCTAA GTTATCGTGA GCTGAACTGC
AAAGCCAATC AGTTGGCGCA AGGCTTGGCG GCAATGGGCG TAACGCGTGA AACAAAAGTG
ATTATTTCAC TTACTCGCGG CCTTGATTTG CTCTGTGGTA TCTTGGCGAT TATTAAAGTC
GGTGGGGTTT ATGTGCCGGT AGATCCCAAA GCCCCTGCCA AGCGTATTAA CCATATTTGT
ACTGATAGCG GTGCACAGTG GGTATTGTGC GATCAAGATT GGCAGCATGG TGACGTTAAC
GTGATCGACA TTGCCAAATT GACTGCACAA ACTCAACAGT ATGAAGACAG GGCTCCAGCG
GTTAATATTG AACCGCATGA TGCGGCATAC ATTATTTATA CGTCAGGCTC CACAGGCTTG
CCAAAAGGAG TGGTGGTAGA GCACCACAAC TTAGTGCGGT TAGTGGGGGC TGCGATGAAT
GCTTTTGACT TTAATGCTGA CGATGTGTGG TGCTTGTTCC ATTCCTTTGC TTTTGATTTT
TCCGTGTGGG AGATTTTTGG CCCTTGGTTG ACAGGGGGGG CGGTGGCGAT AGTCCCGGAC
GAATGCTTGT TGCAACCTGC ACTGTTCCAT CGTTTCTTGC TGGAAAACAA AGTCAGCATT
CTTAATCAGA CACCTTCGGC ATTTTACAAT CTCATTGATG CCGATAACCA AGTCGATGAG
CCGCTGAGTG AGCTGCGTTA TGTTGTATTT GGTGGTGAGG CACTGTCTTT GCCACGTTTG
GCATCTTGGC AGCAGCGTTA TGATGCCGAT AGGGTCAAGC TAGTCAATAT GTACGGCATT
ACTGAAACGA CTGTCCATGT GACTCATTAC ACAGTAAAAG CTGGCGATTG TAAGCAGGCC
CGCAGCATCA TAGGTTTACC TTTGTCAGAT CTTGACGTTT ACTTGCTCGG TAGTGACGGG
CTTCCTTTGC CGGAAGGTAC TAAGGGGGAG TTGTATATCG GTGGACCTGG TGTGGCGCGG
GAGTATTTCG GTAAGCCTGA AATGACGGCA CAGCGATTTG TTACTCATAC GACTGCAGGC
CGACTCTATC GCAGTGGTGA TTTTGCTCGA CTCGATAATG ATGGGCAACT TGTTTACCTC
GGACGTAAGG ACGATCAAGT CAAGATCCGC GGCTATCGAA TCGAGCTTGA AGAAGTGAGG
CAACAACTGA TGTCTCTGGA TGCCGTGAAA ACAGCAGTCG TTACCGTAAG TGATATCGGT
GCTGGTGATA AACTTATTGC TTTTGTTATC CCTCAGGTGG CGGAATTATT CGTGGCTTCG
GTTATCAAAC ATGAGTTGGC CAAAAGATTA CCCCCTTACA TGATCCCTGC AATCTGCCAT
CCAATTGAGC ATATTCCGCA AACCAATAAC GGTAAAGCCG ACATCAAGTG GTTGTTGAGT
GAATATAAGC GGCAACAGCA AAGCTCTTCT GTACAGAATG CGCCTATGTT GGATCATCCT
ATCTATGCTG TTATCGCGAA TGTGCTTGGA ATTCATTCCA TCGCTGCCGA CGATAATTTG
TTTACCTTGG GGCTGGATTC CATCTCTTGC ATCCGCCTTG TCATTGATGC CCGCGAACAG
GGAATACATT TTAGTGTTGC TGATATTTAC CGTGAATTGA CACCGAGCAG GCTGTTGGCG
CTGGTAGAGA AACCGCCCTC TGGGACAGAG GTTGTGGTGC CAGATCAGCT TATATACCTG
AGCAATGCTG AGCAGCAACT GGCGGGTGGT GAGTTTGAGA TGGTTTATCC ACTGACTCGT
TTACAGCAAG GGATGTGTTA TCACAGTGAA TTAGATGCAA CAGCGGGTGT TTATCACGAT
GTATTCGGCT ATCGTCTGCA AATGCACTTT GATGTTAATA CCTTGCATCG TGTGCTTAAG
GATATGATGG TAATACACCC AGTATTGCGA ACTCGTCTCA TCAAAGGAGC AGAAAGGTTG
TTGCAAGGGG TTGTTGCTAA TCCAGATGTT CCACTGCAGG TACATGACTT AGGTGGCGAT
ATTGAGCTGG CACTGGAGCA ATATAGGGAG TTTGTCAACA TCGAGATCGC CAATGGTTTC
GATTACCATG ATCCACTGCT ATATCGTTTA TTTTTACACC GCTTCGACGA TGGGAGTGAG
CAGCTGACGT TAAGCTTTCA TCACGCTTTA TTCGACGGTT GGTCTGTAGC TAACTTCAAT
ACCGAACTAA TCAAACGTTA TTTTTTTGCC GTTGAGGAAA AGCCTTATTC CATACTCGCG
GGCAACAATG GTCATTACCG AGATTATGTT TTTGCTGAAT TGGCCGCACT GAAGGATGGA
TCTCATCGTC AATTTTGGCA GGCATTGCTT GATGGGGCGC AGGTCAGTGA ATTGCCATCG
GTGGCAAGGC AGGCGCTACC GGTAGATGCG GGGTTTACTC ATATACCTTG TCAGTCTTTT
GAACAAAACT CAGATGCACT CATGGCTGAA GCCAAAGTTG CTGGGGTTAC CGTGCGACAA
TTGATGTTGG CGATACACTT AAAAGCACTT TCAATATTGA CCCATAAGAC GCGGGTTAAC
ACTACTGTGG TGTACCATAA TCGATTGGAT GTTGCTGGTG GCGATGTTCA ATTGGGATTA
TTTTTAAACT CTTTGCCCTT TGATATTAAT CTTACGAGCG AGACTTGGTC GAGTGTGCTC
GACCAAGTTG TGACCTTGGA CCGGCAAATC ATGGCATACC GTGCCCTACC TACAGATGAG
ATCCAGAAGC TCAGTGGTTT ATCATTTCAG TCGGTATTGT TTAATTACAC TGATTTTCAC
GTGTACGATG GTTTATTCAA TGAAGGTTTA CCGCTTATCG ATAGCACTGT TTTTGAAAGC
GTGAATTTTC CACTGACTAT CGATTGTGGC GTATCAGTGA AAACAAGGCA GTTACGATTT
CAAGTGGGAT TTGATGGTCG ACAGCATTCT CAACAAAGCG TTTTACGCTA TGTCGCAGTT
GTCGATGCCT TGTGTTTACA CATTCTGAAA CAACAAAAGT TGCCTTTACC TCGATGGCAA
ACATTGTTTC CCGATGAACG ACATGAACTC GAGGCTTTGA ATAAGGTTTC AACCATCATT
GAAGAAATGG CTTTACCCAT AGATCTGAAT GCAATCGCAT TGATGATGGG TGAAAGGCGG
GTGAGCCACG GTGAATTGAA TGCGTTAGTC GAAACCTTGG TGCAATCTTT GGCTATAGAG
CGTGGGACTA GGATCTTACT TCATTTATCT AAGTCGGTTG AGTTTGTCGT TTGGCTATTG
GCCTGTATGC GTAAAGAGTT AGTGGTAATT CCACTGCCGG TGGATGCCGA TCCGTTACGT
CAACAGAGCA TTGTTGAGCA CGCCGATGCG GCTTATATTG TCAGCGAACA GCCACAGACA
TTCGGATATC AGGTTATTTC ATCGCAAGAT CAAAGTGATA TTGTGTTGGG TTACAAGTCG
CCGTTACACA CTCCGAGTGA GAGTGCTGCA ATAGTTATGT TTACCTCGGG TACGACTGGG
AAGCCCAAAG GGGTGGTTTT ATCCTTACAT TCGTTACAGG CCCATAGCCG AGCAATGGCA
CGGACATTGT CACTTACTAC TGATGATCGT GTCTTGTGGT TTGCCTCAAC GGGTGCAGAT
ATTACGCTAG AACAAGTGAT CGCGCCGTTA AGTGTGGGTG CTTGTGTGGT CATTCCTGAG
AAAATTTGGT CCATGGCAGA GTTTTTACCA CAAGTTGCTG TAAGTGGTGT CACTGTTGCC
GACTTACCCC CTGTGTATTT CCAATGGTTG ATGCGTGCTG ATGCTAAGCA AAAGCAAGCT
TGGTTGGATA GTCCTTTGCG CATGGTACTG CTCGGCGGTG AATCTATGCC ACTTTCGGTT
ATCAAAGCAT GGCAGCAGAT GCAGTTACCG CAAAAATTGC AGCTATTCAA CGTTTATGGT
CCGACAGAAG CGACTATTAC AGCATCGGTC TTTCCTATTT CTGCTGGGTT TAACGATGTG
AAGGTGTCCT TGGGTATGCC TACCGAGGGT AATGGTTTTT TAGTGCTAGA TTTACAAGGA
AAGCCTGTAC CCGCGGGTGT GGAAGGCATC TTGTATATTA CAGGTGAGAG GTTAGCTAAT
GGTTACCTTT TCAATGAAGA AAAAACCACA GAGGCATTTA TCGAGGGCAT CGATGGTGAG
CTGATGTACC ACACTGGCGA TATCGTCAAA TGGCTTCCAG ACGGCACCTT GTGGTTCGTG
GGCCGTAGCG ATGCCCAGGT CAAGATCCGT GGATATCGGG TTGAGTTGGA TGCGGTTCAG
CACTTTTTGG AATCAAGGGA AGATATTCAT GAAGCAGTAG TGCTTTATAA TCGAATTAAA
CAGCGAGATT TGTTGCTGGC CTTTGTGGTT GCTTCGACTG AAGTTACTGG AGTCGCGAAG
CGAACACTCG CAAGTATGAG ATCAGAGCTG CCACATTATA TGGTTGCCAA CCGTATCATA
GTGGTAGATC AGATACCTTT GACAGCCAAT GGTAAAGTTG ACAGCAAGGC ACTGATTTTA
CTAGCTGAAA ATGGACTTGA AACTAACACG ACACTCAGTG GTACGGCGTT GAAGCTTGCC
GTTCTGATTG CGCAGGTGCT CGGTCAAACG CCAAAATCAG GTGATGAAAG CTTTTATGAT
CTTGGTGGTG ATTCGCTTCA AGCACTACAA CTGCTTTCGT TGATAAGTGC AAGGTTTGGT
GTTGATATCG CGCTGCAGCA GTTGCTTGCA AATAGCGATA TTAATGGGCT TGCGGAGCTT
ATCGATCAAG GTAAGAGTGA AACCACGGAT GCAGTGGTGT GCCTGAGTCG ATCCGATAAA
TTGCCAGTTG TGCTCTGTAT CCCTGGCGCT GGCGGTGTCG CGGGGGACTT TATCGCATTG
GCCAGTCATT TTCCCGAAAA TAGTGTTTAT GCTTTACAGG CTCCGGGATT GCAATTCGGT
CATATTCCTG TGAGCTTCGA ACAATGGATG GATTATGCCC TGCAGGCGGT TAAAGCTTTG
CCGCGAAGGC CGGTTATGTT GGTTGGCCAT TCGATGGGCG GTTGGCTCGG GGCTCAATTG
AGGCGACGGG TCTTTGGTGA GGCAAAGTTG GTACTACTGG ACAGCTATGT CAAGTTGAGT
GAACCGCAAA ATGTCGAGCG TTTTATTGCC GAACAGGTAT ACAACAAGCT GGCAGTGATG
TCATTGGACT TTTCATTACC TCCTCGAGCT GGGCTAGATG AGTTACTACA GCTTTTGGGC
GAGCAACAAG CTCACGGCGA TACTTCAGGT GTAGGCTTGT GGCTGAATCT ACTAAAACTG
ACTCGTGCAC AGTTGAAAAT GACACCAAGT TGGGGGGACC CTCTGGGTGA GATGACGCTG
ATTAATGCCG AGCACAGTAT TGTGACTCGA GGCCCGGCGG GAGATGCTTG GTCTGAGTTT
GGCGATGTTG AAGAGATTAG GATTACAGGG GATCACTTCG GGATTGTCAC TCATCCAGAT
TTGCCATCAA TGTTACTGAA CGTTTTACAA TCGACTAAGG AGCTGTATTG CCGATGA
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| Protein sequence | MNDSLYKAAD LLQHCAEQGM ALSLNGQGGL SFQHYGQGDS TPLLVQVKAL KSELVDYFHL
LGTAPQRVPI RADVQQLLLY RQQIAEQNSA FNIALQFELV GELDFSDFKV WAETLVQRHT
RLQSRFVMHK GKLYAQFDPF VAVVVGHHRQ QANLDAFRTA PFDLQNGPLY RFDWVETADN
KRFVSLVFHH LVFDGHSLQL LVKDVRQYLC QNVASLNLIP ATASWLPQVH SNQVDMATYV
EHINGFETLD WQQTFGGSSN GSGMALLHRE YLSASHFAQL NRLAQKHQMS PFALQSAITA
LVIGIYSDSR RFLLFTPADR RTSEQHEYIG HFVQMLAIQC ELKLGGEVAD YLSASRDAFM
QAQAHTALSY DNANRWCLSQ NHGALPPIKA VIVQQTLPQS VIELAGGKAQ LHFLAAETRA
VKYPLMLNCQ SDGRQLQLEW EYDSSLFSEQ HIRQMQQHWL MILELLDSGG ACLFDQLSKT
LLAKYHHAPL NRLKGSTASV QAHWRNRTIT DIWQHSVAQF ADRKAAGFGD NWLSYRELNC
KANQLAQGLA AMGVTRETKV IISLTRGLDL LCGILAIIKV GGVYVPVDPK APAKRINHIC
TDSGAQWVLC DQDWQHGDVN VIDIAKLTAQ TQQYEDRAPA VNIEPHDAAY IIYTSGSTGL
PKGVVVEHHN LVRLVGAAMN AFDFNADDVW CLFHSFAFDF SVWEIFGPWL TGGAVAIVPD
ECLLQPALFH RFLLENKVSI LNQTPSAFYN LIDADNQVDE PLSELRYVVF GGEALSLPRL
ASWQQRYDAD RVKLVNMYGI TETTVHVTHY TVKAGDCKQA RSIIGLPLSD LDVYLLGSDG
LPLPEGTKGE LYIGGPGVAR EYFGKPEMTA QRFVTHTTAG RLYRSGDFAR LDNDGQLVYL
GRKDDQVKIR GYRIELEEVR QQLMSLDAVK TAVVTVSDIG AGDKLIAFVI PQVAELFVAS
VIKHELAKRL PPYMIPAICH PIEHIPQTNN GKADIKWLLS EYKRQQQSSS VQNAPMLDHP
IYAVIANVLG IHSIAADDNL FTLGLDSISC IRLVIDAREQ GIHFSVADIY RELTPSRLLA
LVEKPPSGTE VVVPDQLIYL SNAEQQLAGG EFEMVYPLTR LQQGMCYHSE LDATAGVYHD
VFGYRLQMHF DVNTLHRVLK DMMVIHPVLR TRLIKGAERL LQGVVANPDV PLQVHDLGGD
IELALEQYRE FVNIEIANGF DYHDPLLYRL FLHRFDDGSE QLTLSFHHAL FDGWSVANFN
TELIKRYFFA VEEKPYSILA GNNGHYRDYV FAELAALKDG SHRQFWQALL DGAQVSELPS
VARQALPVDA GFTHIPCQSF EQNSDALMAE AKVAGVTVRQ LMLAIHLKAL SILTHKTRVN
TTVVYHNRLD VAGGDVQLGL FLNSLPFDIN LTSETWSSVL DQVVTLDRQI MAYRALPTDE
IQKLSGLSFQ SVLFNYTDFH VYDGLFNEGL PLIDSTVFES VNFPLTIDCG VSVKTRQLRF
QVGFDGRQHS QQSVLRYVAV VDALCLHILK QQKLPLPRWQ TLFPDERHEL EALNKVSTII
EEMALPIDLN AIALMMGERR VSHGELNALV ETLVQSLAIE RGTRILLHLS KSVEFVVWLL
ACMRKELVVI PLPVDADPLR QQSIVEHADA AYIVSEQPQT FGYQVISSQD QSDIVLGYKS
PLHTPSESAA IVMFTSGTTG KPKGVVLSLH SLQAHSRAMA RTLSLTTDDR VLWFASTGAD
ITLEQVIAPL SVGACVVIPE KIWSMAEFLP QVAVSGVTVA DLPPVYFQWL MRADAKQKQA
WLDSPLRMVL LGGESMPLSV IKAWQQMQLP QKLQLFNVYG PTEATITASV FPISAGFNDV
KVSLGMPTEG NGFLVLDLQG KPVPAGVEGI LYITGERLAN GYLFNEEKTT EAFIEGIDGE
LMYHTGDIVK WLPDGTLWFV GRSDAQVKIR GYRVELDAVQ HFLESREDIH EAVVLYNRIK
QRDLLLAFVV ASTEVTGVAK RTLASMRSEL PHYMVANRII VVDQIPLTAN GKVDSKALIL
LAENGLETNT TLSGTALKLA VLIAQVLGQT PKSGDESFYD LGGDSLQALQ LLSLISARFG
VDIALQQLLA NSDINGLAEL IDQGKSETTD AVVCLSRSDK LPVVLCIPGA GGVAGDFIAL
ASHFPENSVY ALQAPGLQFG HIPVSFEQWM DYALQAVKAL PRRPVMLVGH SMGGWLGAQL
RRRVFGEAKL VLLDSYVKLS EPQNVERFIA EQVYNKLAVM SLDFSLPPRA GLDELLQLLG
EQQAHGDTSG VGLWLNLLKL TRAQLKMTPS WGDPLGEMTL INAEHSIVTR GPAGDAWSEF
GDVEEIRITG DHFGIVTHPD LPSMLLNVLQ STKELYCR
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