| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3715 |
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| Symbol | |
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| ID | 4020277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4456602 |
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| End bp | 4456934 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957779 |
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| Product | nitrite reductase (NAD(P)H) large subunit, NirD |
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| Protein accession | YP_564711 |
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| Protein GI | 91795060 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTT GGATAGATAT TTGTCAGCGC GCAGACATAG TGCCCGGCAC CGGAGTATGT
GCCTTATTAG GTGAGACGCA AGTGGCCGTG TTTCGCTGCC GCCAAACTGA TGCCTTATAC
GCCATAGATA ATTATGACCC CATAGGCCGC GCTCAAGTTT TATCACGAGG GATCATCGGC
TGTGTGGCGG GAGAAACTGT GGTGGCATCC CCCCTTTATA AGCAGCACTT TAACTTAACC
ACCGGCGCCT GTTTGCAATC ACCTGAATAT CAGCTCAAAA CCTATGCCGT GCGCTACCTA
GATGATCGAG TGCAGTTATC TAGCATGCCT TAG
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| Protein sequence | METWIDICQR ADIVPGTGVC ALLGETQVAV FRCRQTDALY AIDNYDPIGR AQVLSRGIIG
CVAGETVVAS PLYKQHFNLT TGACLQSPEY QLKTYAVRYL DDRVQLSSMP
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