| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3691 |
|---|
| Symbol | |
|---|
| ID | 4020248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 4424576 |
|---|
| End bp | 4426957 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637957750 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_564687 |
|---|
| Protein GI | 91795036 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TATTGCAAAT ACAGATCACA GGAATGAGTT GTACTTCCTG TGTCGGCCGA
GTAGAAAAGG CCCTTAAGGC GGTGCAAGGT GTCATGAGTG CGAATGTTAA TCTCGCCACT
GAGATGGCAT CCATCGAAGG CACGGCCAGC TTAGCTGAGT TAGTTGAAGC TGTGGAAGGT
GCGGGCTATA AGGTGCCGAC CAAGACGGCC AGTTATGGGG TTGGCGGTAT GAGCTGTGCA
TCCTGTGTAT CACGGGTCGA AAATGCCATG AAAAGCTTGC CGCAAATTCA ACATGCGCAA
GTGAACTTAG CCACAGAGCG GCTGAGTGTG ACTTATGTAG GTAGCTTAAC TGAGGTGGAA
GTATCGGCAA GTTTAATTCA GGCAGGTTAT AGCCTCGAAG CGCTCCAGGG CGAGCAAGCC
AGCGCAGAAG GGACTAGCGC CAGCGAGCAG GCTTTCTATC ACACAGATTG GTTCCCTGTG
CTGGGCGCCA GCCTGCTGAC CTTGCCTTTA GTGCTACCTA TGTTCGGAAT GCTATTCAAT
AAAGAGTGGA TGTTGCCCGC TGTGTGGCAG TGGCTGCTGG CGACGCCGGT TCAATTTTAC
TTTGGCGGCC GTTTTTATCG GGCAGCATGG GGCGCGCTCA AGGCAAAAAC CGGCAATATG
GATTTACTGG TGGCTATCGG CACCAGCGCG GCTTATGGCT TATCTGTCTA CTTATGGTGG
ACCCATACAG GGCATCATGG AGAGCCACAT TTGTATTTTG AAAGTAGCAG CGCGGTACTC
AGCTTAGTGT TACTGGGTAA ATACCTTGAG CATAGGGCAA AGCGCAGAAC AACGGATGCC
CTAAGAGCCC TAGAAGACTT AAAACCCAGC AGTGCAAGAG TATGGCGCAA TGACAAATGG
CAACAAGTGC TGGCCTCGAC TGTCGTCACC CAAGAACGAG TGCAAATCAC CCCGGGTGAG
CGCGTTCCCG TCGATGGGGT AATAGTGTCT GGGGCGAGCC ATCTGGATGA GGCGCTTATA
AGCGGCGAAA GCATCCCAGT GAGCAAAACC AAAGGGGATA AGGTGACAGG TGGTTCGGTT
AACTTAGATG GTGTGATAGA AGTAGAAGCC ACCAGTGTGG GCACTGAGTC AACCTTAGCC
AAGATCATCC GCATGGTTGA GCAGGCTCAA GGGGCTAAGG CGCCGGTGCA GGCCTTGGTC
GATAAGGTTA GTGCTGTGTT TGTCCCAGTG GTGTTAGTCA TCGCACTTAT CACCTTGCTT
AGCTGGGGGC TGGTGGTGGG TGATTGGCAG TTAGGCATAT TAAATGCGGT GGCGGTTTTA
GTTATCGCCT GTCCCTGTGC CTTAGGGCTA GCAACGCCTG CGGCGATAAT GGCAGGCACG
GGCACTGCCG CGCGCTTTGG TATCTTAGTG AAAGATGCGA CGGCTTTGGA GCAAGCTAAG
GCCATAGATA TGTTGGTATT CGATAAGACA GGCACATTGA CCGAAGGCAA GCCCAAGTTA
TCTCAATTCA GCGCCTTTAT TGGCAGCGAG TCAGCATTAA TGCAGCAGGC CTTTGCATTG
CAGCAGCATA GCGAACATCC ATTGGGCAAA GCGATTGTGG AACAAGCCAA GGCCATGGAG
CTTGAGCCCT TGTCTATAGC CGATTTTAGC GTGGTTGCCG GTAAGGGAGT GCAAGGGCGA
GTCGAAGAGA GTGAGTTATT TATGGGCAGT AGCCTGTGGA TGGAGCAATT GGGCCTAAGC
TTACCGCTCA ATCGCATTGA GGTTGAGGGG GCCTCGGTTT CTTGGTTGGC CAGAACCGTT
GCAGGAGAGA CTGAGTTACT CGGGTTATTT TGTTTTCGTG ATGAATTAAA ACCCCATGCA
AAAAGGGCGG TTAAGCAATT AAAGCAAATG GGGATCAAGG TTGCCATGCT CACTGGTGAT
ACTCAAGCCA GTGCCGAGCT GGTGGCCAAT GAACTCGGGC TAGATCTCTA CTATGCCCAA
GTCTTGCCCG ATGATAAGGC AAAGCATGTG CAAGCGTTTC AGTCCCAGGG TTACAGGGTT
GCCATGGTGG GTGACGGCAT CAATGATGCC CCCGCCTTAG CTCAGGCCGA TTTAGGTATC
GCCATGGCGA CAGGCACAGA GGTGGCGGTC AGTGCTTCTG CCATGACCTT AATGCGAGGG
GAGCCCAATC TGGTCGCTTC GGCGCTTACC ATGGCAAAAT TGACTTATAC CAAGATTAAA
CAGAACCTAT TTTGGGCCTT TATTTTTAAT ATTGTCGGTA TTCCCCTGGC GGCATTGGGT
TATTTGAACC CGATAATAGC AGGCGCGGCG ATGGCGATGA GCAGTTTGCT GGTGGTCAGC
AACGCGCTAT TGTTACAGCA TTGGAAACCT GAGGAGTCAT AA
|
|---|
| Protein sequence | MSQILQIQIT GMSCTSCVGR VEKALKAVQG VMSANVNLAT EMASIEGTAS LAELVEAVEG
AGYKVPTKTA SYGVGGMSCA SCVSRVENAM KSLPQIQHAQ VNLATERLSV TYVGSLTEVE
VSASLIQAGY SLEALQGEQA SAEGTSASEQ AFYHTDWFPV LGASLLTLPL VLPMFGMLFN
KEWMLPAVWQ WLLATPVQFY FGGRFYRAAW GALKAKTGNM DLLVAIGTSA AYGLSVYLWW
THTGHHGEPH LYFESSSAVL SLVLLGKYLE HRAKRRTTDA LRALEDLKPS SARVWRNDKW
QQVLASTVVT QERVQITPGE RVPVDGVIVS GASHLDEALI SGESIPVSKT KGDKVTGGSV
NLDGVIEVEA TSVGTESTLA KIIRMVEQAQ GAKAPVQALV DKVSAVFVPV VLVIALITLL
SWGLVVGDWQ LGILNAVAVL VIACPCALGL ATPAAIMAGT GTAARFGILV KDATALEQAK
AIDMLVFDKT GTLTEGKPKL SQFSAFIGSE SALMQQAFAL QQHSEHPLGK AIVEQAKAME
LEPLSIADFS VVAGKGVQGR VEESELFMGS SLWMEQLGLS LPLNRIEVEG ASVSWLARTV
AGETELLGLF CFRDELKPHA KRAVKQLKQM GIKVAMLTGD TQASAELVAN ELGLDLYYAQ
VLPDDKAKHV QAFQSQGYRV AMVGDGINDA PALAQADLGI AMATGTEVAV SASAMTLMRG
EPNLVASALT MAKLTYTKIK QNLFWAFIFN IVGIPLAALG YLNPIIAGAA MAMSSLLVVS
NALLLQHWKP EES
|
|---|
| |