| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3655 |
|---|
| Symbol | |
|---|
| ID | 4020212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 4371611 |
|---|
| End bp | 4372033 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637957716 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_564653 |
|---|
| Protein GI | 91795002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA AGCGGTTAAC TAACCTGTGT GATATTGAGC AAAAAAAACT CCTAAGGCTG
GGTGAGCAAA AGCAAACAGC CCATCAAAGA CTAAATACCA ATCAAGCTCA ATGTCAGCAA
TTGACTCAGA TGATAGCCCA ATATCGCAGT TGCGATGCTC ATGGGCAGCA CCCACTGCTG
TGGCAAAATG CCAACAATAT GGCTCAGGTA TTAGTGCCTA TGACGGCTAA ATTGCAACAA
ACTCAAAGCC TATTGCAACA AGAGCAGTTA CGACTGGATC ATCTTTGGCG TCGTCAACTC
GGGCGGCAAC AAGGGATGAA ATGGCTTCAA GGGCAAAGAC AGGCACAGGC CTTAACCGTG
GCCGCACAGC GAGAACAAAA AAGTGCTGAT GATCTCGCCA GTTTTTATAC TGGTTCAAGA
TGA
|
|---|
| Protein sequence | MSHKRLTNLC DIEQKKLLRL GEQKQTAHQR LNTNQAQCQQ LTQMIAQYRS CDAHGQHPLL
WQNANNMAQV LVPMTAKLQQ TQSLLQQEQL RLDHLWRRQL GRQQGMKWLQ GQRQAQALTV
AAQREQKSAD DLASFYTGSR
|
|---|
| |