Gene Sden_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3600 
Symbol 
ID4020157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4314453 
End bp4314983 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content43% 
IMG OID637957661 
Producthypothetical protein 
Protein accessionYP_564598 
Protein GI91794947 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAT ATTTCCGTTT GTTTTTATTG CTTTTTTGGC GTACTCGCCA TTGCCGCCGC 
ATCGATTTTT TAGATGTCAG CCGCATTCAA TACCGTGCCC TGCCTAGTGA TTGTGATGTA
AACTTTCACT TAACCAATTC CCGCTATCCC GCTTTTATGG ATCTAGCTCG TACCTATATG
CTGGCAGAAA TGGGCCTGTT GAAGAAATTC ATTAAGCTTA AATGGATGCC GATCGTCAAT
GCCGCGGAAT TCACTTATAT ACGTGATATT AAACCGTTTC AAAAATTTGA AATTGAAACC
AAGATTGTTG GTTGGGATGA AAAGTACTTT TATATAGAAC AGCGTTTTGT CAGCGAGCGT
GGCCTGCATT GCATAGTGCA TGTGCGCGGC GTATTCGTCT GTAAGGGTAA GCAAATCCCC
CTCGACACCT TAGTCGCCGA AGCGGGCTAT AAAGGCGATA CACCGCGGCT GCCAGCAGAA
GTGGTAATGT GGAAAGATTT TTTACAGCTT AAAAAAGAGC GCAATATATA G
 
Protein sequence
MNLYFRLFLL LFWRTRHCRR IDFLDVSRIQ YRALPSDCDV NFHLTNSRYP AFMDLARTYM 
LAEMGLLKKF IKLKWMPIVN AAEFTYIRDI KPFQKFEIET KIVGWDEKYF YIEQRFVSER
GLHCIVHVRG VFVCKGKQIP LDTLVAEAGY KGDTPRLPAE VVMWKDFLQL KKERNI