Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3595 |
Symbol | |
ID | 4020152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4309481 |
End bp | 4311520 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957656 |
Product | oligopeptidase A |
Protein accession | YP_564593 |
Protein GI | 91794942 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACC CGCTATTGAG TGGCGCCGCC TTACCGCCTT TTTCCCAAAT TAAGCCTGAA CATATTCAGA CCGCGGTAGA GCAAGCTATC GCCAAATGCC GCAATACCAT AGAGACCTTA TTGGCGCAGA ATAGCCACTA CACTTGGGAT AACTTAATTG CCCCCCTTGA GCAAAGTGAT GACGAGTTCA GCCAAATTTG GTCGCCTGTG TCCCACATGA ATTCAGTCAC CAGCTCAGAT GCGCTGCGGG AAGCTCACGA TGCTTGCCTA CCCTTGCTGT CAGATTACGG CACCTTTGTT GGTCAACATC AGGGCCTGTA TCAAGCCTAC AAATCTATCC ATGAGTCGGC TGAATTTACT CACTTGCCAC AAGCTAAAAA AATGGCCATA GAACAAAGCT TGCGAGACTT TGAGTTGTCT GGCATTGGCC TAGATGATGA GCAAAAAGTA CGTTATGGCG AAATCGTTAA ACGTCTGTCT GAGCTCACAA GCTTGTATTC CAATCAGTTG CTCGATGCTA CCCAGGCCTG GCACAAGCTG ATCACCGATG AATCAGAGCT GGCGGGTTTA CCGGATTCAG CTAAAGCGGC GGCCAAAGCC ATGGCGGAAG AAGATGACAA AAGTGGTTGG TTATTCAGCT TAGATTTTCC CTCCTATTTA CCTGTGATGA CCTACAGCGA AAACCGTGCA CTAAGAGAAG AATGTTATCG CGCCTTCGTC ACCCGCGCCT CAGATCAAGG CCCCAATGCC GGTGAGTTCG ACAACAGTGC CGCCATGGAT GAAATTATCG CCCTGCGCCA TGAATTAGCC CAGCTACTCG GGTTTGAATC TTACGCTCAC AAGTCTTTAG CCACTAAGAT GGCCGAAACC CCAGAGCAAG TATTAACGTT TTTAAGCGAA CTAGGTCAAC GCTCGAAAGA GCAAGCCAAG ACAGAGCTTG CCGAACTGCG AGCCTTCGCC TTAAGCGAAT ACGGCGTCAG TGAAATGGAG TCCTGGGATT TAAGCTTCTA TGCTGAAAAA TTGCAGCAAC ATAAATATGA AGTTTCTCAA GAAATATTAA GACCTTACTT CCCTGAAGAC AAAGTGCTAT CTGGCCTTTT TTATACGGTA TCACGCCTGT TTGGGCTACG TATCGAAGAG CAGAAAGATG TCGATACTTG GCATAAAGAA GTGCGTTTCT TCAATATTTT TGATGACACT AATAGCCTAA GAGGCAGCTT CTACTTAGAT TTATATGCCC GCACTGGTAA GCGCGGCGGC GCCTGGATGG ACGACTGCCG AGTGCGTCGT CAAACCCCAA ACGGCTTGCA AAAACCTGTG GCCTATTTAA CCTGTAACTT CAATCGCCCA GTGGATGGCA AGCCTGCCTT GTTCACTCAT GATGAAGTCA CCACGCTATT CCATGAATTT GGCCACGGCA TACACCATAT GTTGACCAAA ATTGATGTGG CCGATGTGTC TGGCATTAAT GGGGTACCTT GGGATGCGGT GGAGCTTCCG AGCCAATTTA TGGAAAACTG GTGCTGGCAA GAAGAGGCAC TAGGTGAAAT ATCCGGTCAC TTTGAAACCG GCGAGCCCTT ACCTAAAGCG TTATTAGATA AAATGCTGGC GGCGAAAAAC TTCCAATCTG GCATGATGAT GTTGCGCCAA CTTGAGTTTT CATTATTCGA TTTTAGAATG CATCTGGAAT ACAGTGCCGA GAAAGGCGCC AACATCCAAG GCATGTTAGA TGAAGTGCGC AGCCAGGTAG CAGTATTGAC TCCGCCAAGC TTTAACCGCT TCCAACACGG CTTTGCCCAT ATCTTTGCTG GCGGCTACGC GGCAGGCTAT TACAGTTATA AGTGGGCAGA AGTGTTATCG GCCGATGCCT TCTCCCGTTT CGAAGCCGAA GGTATATTTA ACCCTGAAAC CGGTAAAAGT TTTATGAACA ACATACTCGA GATGGGCGGC AGCGAAGAGC CGATGACATT GTTCAAACGC TTTATGGGCC GCGAACCGAA TATTGACGCC CTGTTAAGGC ATTCGGGCAT CAAGGCTTAA
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Protein sequence | MSNPLLSGAA LPPFSQIKPE HIQTAVEQAI AKCRNTIETL LAQNSHYTWD NLIAPLEQSD DEFSQIWSPV SHMNSVTSSD ALREAHDACL PLLSDYGTFV GQHQGLYQAY KSIHESAEFT HLPQAKKMAI EQSLRDFELS GIGLDDEQKV RYGEIVKRLS ELTSLYSNQL LDATQAWHKL ITDESELAGL PDSAKAAAKA MAEEDDKSGW LFSLDFPSYL PVMTYSENRA LREECYRAFV TRASDQGPNA GEFDNSAAMD EIIALRHELA QLLGFESYAH KSLATKMAET PEQVLTFLSE LGQRSKEQAK TELAELRAFA LSEYGVSEME SWDLSFYAEK LQQHKYEVSQ EILRPYFPED KVLSGLFYTV SRLFGLRIEE QKDVDTWHKE VRFFNIFDDT NSLRGSFYLD LYARTGKRGG AWMDDCRVRR QTPNGLQKPV AYLTCNFNRP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK IDVADVSGIN GVPWDAVELP SQFMENWCWQ EEALGEISGH FETGEPLPKA LLDKMLAAKN FQSGMMMLRQ LEFSLFDFRM HLEYSAEKGA NIQGMLDEVR SQVAVLTPPS FNRFQHGFAH IFAGGYAAGY YSYKWAEVLS ADAFSRFEAE GIFNPETGKS FMNNILEMGG SEEPMTLFKR FMGREPNIDA LLRHSGIKA
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