Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3565 |
Symbol | |
ID | 4020122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4280558 |
End bp | 4281112 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637957626 |
Product | periplasmic protein thiol |
Protein accession | YP_564563 |
Protein GI | 91794912 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | [TIGR00385] periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000644291 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGT TAATTTTATT TGTGCCATTA ATGATCTTTT TAGGCATGGG CTTTTTTCTC TATAAAGGAT TATTTCTCAA TCCTAAGGTG CTGGAGTCGG CTTTAGAAGG TAAGCTGGTG CCGTACTTTG AGTTGGAGCA ATTAGAGCAA TCTGACAAAG TGATTACCAA TAAAGATCTT ATCGGTAAAG TTGCCATGCT AAACGTATGG GGCACTTGGT GTCCTGCATG TAAGTACGAG CATCCTTATT TAATGGTGCT TGCCCGTAAC AAGCAAATTC CCATTTACGG TATTAACTAT CGTGACGAAC GAGATATGGC ACTGGAGGAG TTAAAACTTC AAGGTAACCC CTATGAAATT AACATTTTCG ACAAAGATGG CCGTCTTGGA TTGGATCTTG GCGTTTATGG TGCGCCTGAA AGTTTTCTTA TCGATCACCA AGGCATAGTC AGATACCGTT TTGCAGGGCC TATCGATCAG CGTATATGGG CCGATACCTT ATATCCAATA GTTAAAACTT TGCAGGAGCA AGCTGTAAAA GATGGAGCCT CATAG
|
Protein sequence | MKKLILFVPL MIFLGMGFFL YKGLFLNPKV LESALEGKLV PYFELEQLEQ SDKVITNKDL IGKVAMLNVW GTWCPACKYE HPYLMVLARN KQIPIYGINY RDERDMALEE LKLQGNPYEI NIFDKDGRLG LDLGVYGAPE SFLIDHQGIV RYRFAGPIDQ RIWADTLYPI VKTLQEQAVK DGAS
|
| |