| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3533 |
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| Symbol | |
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| ID | 4020087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4236322 |
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| End bp | 4238187 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637957591 |
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| Product | asparagine synthase, glutamine-hydrolyzing |
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| Protein accession | YP_564531 |
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| Protein GI | 91794880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGGAA TTACAGGGAT TTTTATGCAA GATGTTCAAG CCGGCCAACA TGCTGATATT
GAACTATTAA AAAGAATGAC TCAAAGCATT GTTCATAGAG GACCTGACGA TCTGGGCTTG
TATGCCAGCG AGCAAGCCTG CTTTGGTTTC AGACGTTTGT CTTTTCTTGA TTTGAAGCTG
GGTAACCAAC CTATTTTTAA CGAGGATGAA AGTATTGCTT GTGTCGTCAA TGGTGAGATT
TTTAATTATC AGGAACTTAG AAATGATTTA ATTAAACGCG GGCATCGCTT TCGCTCGCAA
ATGGATTGCG AGGTGATACC GCACTTATAT GAAGAATACG GTATCAATTT TCTTAACAGA
CTTAACGGCC AGTTTGCTAT CGCTTTACAC GACGTCAAGC AGCAAAAACT TATCCTAGCC
AGAGATCATG TTGGTATTGC TCCACTTTAT TATCATTATA AAGATAATAC ATTGTTATTT
GGTTCTGAAA TAAAAACCCT TTTAAACAGT GCTGACGTCA GTCGTAGCAT TGATTTAATC
AGCCTAGATC AAATTGTCAC CTTTCCAGGT ATGGTTAGCC CAAGAACCAT TTTTAGTGAC
GTTAAATGCT TGCCGCCCGG TCATGTCATG ACAGTAGATA AGCAAGGCAT GCAGATTGAG
CAATATTGGG ATCTGGATTA CCCTGAGAAT AACCCTAATA CTCAACCTCA CACTGATGCA
TATTACGTTG AAAAGCTGGA CCATTTACTA CGTCAGGCAA TAAAAACACG CTTGCATGCT
GATGTTCCTG TGGGGTTTTA TTTGAGCGGT GGCCTAGACT CATCACTTAT CGCCACACTG
GCCCACGATA TGGACCCCCA GCAAGTATTC AACTCATTTG CCATTGGGTT TGGCCGTGCG
GATATTGACG AACGCCAATA TCAACAGCAA GTGGTTAACC AAATACATTC AAACCATCAT
GAACAGATTT TTGATTATGA GCAAATTAAC CAACGCTTGA CTCAGGCTGT TATCGCAGCC
GAATCCCCCT TAAAAGAGTC CTATAATACC TGCTCGCTAG CGTTATCACA GATGGTTCAA
CAACAAGGAA TAAAAGCAGT ATTAACTGGT GAAGGTGCTG ACGAACTGTT TGCGGGATAT
GTGGGTTATC GTCTGGCCCA GCAATCACGC GGACAAGAAG AACCCTTTGA CCTTGAATTT
ATGCTGGAAC AACAAGCCAG AAAAACGCTA TGGGGAGATG AAAACTTTTT CTACGAAAAG
AACTATCACG AGTTTCATAC TCTCAAGAGC TCACTTTATT CGGCTGATAC CAACGCCGCT
TTGCTTAGGC AACACTGTAC TTCCCAGCCC ATAATTAACC CTGCACGGAT AGCCAATCGT
CATCCCACTC ATCAGCGCTC TTATGTTGAT TTTAAATTAC GTATCGCCGA TCACTTATTA
GCCGATCATG GAGACAGAGT CACATTTGCT AATTCGGTGG AAGCCAGATA TCCATTTCTT
GATATTGATT TAATTAATTT TGTTCGCACG ATACCTCCAG AGTTGATGCT AAAAAACGGC
AATGAAAAAT ACCTGCTAAA ACAACTCGCA ACTAAAACGG TGCCTGAGTC CATTATACGA
CGCAAGAAAT TTTCTTTTGT AGCCCCTGGT AGCCCTTTTC TTCTGAAAAA TAAACCCGAA
TGGATTATGG ACATGCTCAG TAGAGCCACC ATTACTCGCC AAGGGATTTT TAATCCCGAT
ACCGTAGAAA GACTGACTAA TAGTGCCATC AGGGGGGCCC ATGACATCAA TCAAACTTTC
GAAACAGACT TTCTAATGGT GGTTATTACC ACAGGTATCT TACTTCGCGA GTTTGTTGAG
TCATAA
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| Protein sequence | MCGITGIFMQ DVQAGQHADI ELLKRMTQSI VHRGPDDLGL YASEQACFGF RRLSFLDLKL
GNQPIFNEDE SIACVVNGEI FNYQELRNDL IKRGHRFRSQ MDCEVIPHLY EEYGINFLNR
LNGQFAIALH DVKQQKLILA RDHVGIAPLY YHYKDNTLLF GSEIKTLLNS ADVSRSIDLI
SLDQIVTFPG MVSPRTIFSD VKCLPPGHVM TVDKQGMQIE QYWDLDYPEN NPNTQPHTDA
YYVEKLDHLL RQAIKTRLHA DVPVGFYLSG GLDSSLIATL AHDMDPQQVF NSFAIGFGRA
DIDERQYQQQ VVNQIHSNHH EQIFDYEQIN QRLTQAVIAA ESPLKESYNT CSLALSQMVQ
QQGIKAVLTG EGADELFAGY VGYRLAQQSR GQEEPFDLEF MLEQQARKTL WGDENFFYEK
NYHEFHTLKS SLYSADTNAA LLRQHCTSQP IINPARIANR HPTHQRSYVD FKLRIADHLL
ADHGDRVTFA NSVEARYPFL DIDLINFVRT IPPELMLKNG NEKYLLKQLA TKTVPESIIR
RKKFSFVAPG SPFLLKNKPE WIMDMLSRAT ITRQGIFNPD TVERLTNSAI RGAHDINQTF
ETDFLMVVIT TGILLREFVE S
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