| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3506 |
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| Symbol | |
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| ID | 4020060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4194549 |
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| End bp | 4195124 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957564 |
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| Product | hypothetical protein |
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| Protein accession | YP_564504 |
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| Protein GI | 91794853 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0742] N6-adenine-specific methylase |
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| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.124416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAAA ATAAACAAGC CAGCGGTCAG GTGAGAATTA TTTCCGGCCA GTGGCGCTCT
CGCCGCCTTC CTATTCATGA TCTTGAAGGC CTTAGGCCGA CCACTGACAG GGTGCGCGAA
ACCTTATTTA ATTGGCTAGC ACCAGAGATT AAAGGTGCCC GAGTACTGGA CTGTTTCGCC
GGCAGCGGCG CATTGTGCCT AGAGGCTTTG TCGCGTTATG CAAGTTTTGC CAAAGTGTTT
GAGCTGCAAA AAAGTGCGGC CCAGCAATTA AAACAAAACT TAGCCAGCTT AAGCTGCCCC
CATGCCGAAG TGGTCAATGG CGATACCTTA AATTTGTTGA AGCAAGGCAC AGACCTAGGC
TTTGACATCG TCTTTATCGA CCCTCCCTTT CGTAAAGACT TAGCCAACCC GACAATGGCG
CTGCTCACAG AACATGGCTG GTTAAACCCT GAGGCGCTTA TCTACCTTGA AACGGAATCA
GAACTCAGCC AGTTAGAGAT CCCTAGTACT TGGCAGGAGC TTAAACACAA AACAGCGGGT
CAAGTGAGTT ACCGTTTACT GCAATATTGC CCTTAG
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| Protein sequence | MTKNKQASGQ VRIISGQWRS RRLPIHDLEG LRPTTDRVRE TLFNWLAPEI KGARVLDCFA
GSGALCLEAL SRYASFAKVF ELQKSAAQQL KQNLASLSCP HAEVVNGDTL NLLKQGTDLG
FDIVFIDPPF RKDLANPTMA LLTEHGWLNP EALIYLETES ELSQLEIPST WQELKHKTAG
QVSYRLLQYC P
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