Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3505 |
Symbol | |
ID | 4020059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4192852 |
End bp | 4194315 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637957563 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_564503 |
Protein GI | 91794852 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000471575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AAGGCTTTTT TTCCTGGTTT CGTAAAGACA AAACCGCAGA TGAAATCGAT GCAACACAAA ATGACTCAGC GAATGAAAAG TCGTTAGCAG AACAACAAGC GGCGCAAGCC GAAAATGCCC ACCTTGAGGC AGAGCAGGCG GCGCAAGCGG AAGCGGCTCG ACTAAAGTTA GAGCAGACAG AGCAGGCGGC CCAAGCAGAA GCGGCTCGAC TAAAGTTAGA GCAGGCAGAA CAGGCGGCGC AAGCAGAAGC GGCTCGGCTA AAGTTAGAAC AGGCTGAACA GGCGGCACAA GCCGAAGCGG CTCGTCTAGA GTCAGAACAG GCTGAACAAG CTATTCAAGA AAAAGCCGCC CTAGACCAAA TTGCCAAAGA GCAAGCACAA GCGTTAGCCG CAGCCGAGCT AGCCGCCAAA GAGCAAGCGC AAACTGTCGC CGAAGTGCCA GAGAACATTC AAGACGAACC ACAGCAAAAG CCAGTCAAAG AAGGCTTATT TGCCCGTTTA AAACGTGGCT TGATGCGCAC CAGTGAAAAT ATCGGCAGTG GTTTTATTGG CTTATTCAAA GGCAAAAAAA TCGATGATGA TTTATTCGAA GAATTAGAAG AGCAATTATT GATTGCCGAT GTGGGGGTTG AAACCACCAC TAAGCTGATT GCTAAATTAA CCGAGCATGC TTCACGCAGG CAGCTTAAAG ATGCCGAGGC GCTGTATGAT CTGATGCGTG ATGAAATGCA AAAGATGCTA GAGCCAGTGG CCATCCCTTT AGTGCCAGAT AATAGCGAGG GGCCTTTTGT TATTTTAATG GTGGGCGTTA ACGGCGTGGG TAAAACAACC ACCATAGGTA AGCTCGCCAA GCAGTATCAG AGCCAAGGCA AATCTGTGAT GTTAGCCGCA GGTGACACGT TCCGCGCCGC TGCCGTTGAG CAATTACAAG TTTGGGGACA ACGTAACAAT ATTCCCGTGG TGGCTCAGCA TACTGGTGCC GATAGCGCTT CTGTCTTGTT TGATGCCTTC CAAGCGGCAA AATCCCGTAA AGTGGATGTC TTGATTGCCG ATACCGCAGG GCGCCTGCAA AACAAGAGCC ACCTGATGGA AGAACTTAAG AAAGTGGTTC GCGTCATGAA AAAGCTCGAC GCTAATGCCC CCCATGAGGT GATGCTAACC TTAGATGCGA GCACAGGGCA AAATGCCATT AGCCAAGCTC AGCTGTTCCA AGAAGCTGTG GGTGTGACTG GCATTACCTT AACTAAGCTC GATGGCACAG CTAAAGGCGG GGTGATTTTC GCTATCGCCG ATAAGTTCTC TATTCCTATT CGCCACATTG GTGTCGGCGA GCAAATCGAT GACTTACGTA CTTTTAATGC CGCCGATTTT ATCGATGCGC TCTTTACGCA AGAAAGGGTT CCTCAAGAAA AGGTTACTCA AGAAAGTGCG AGTCAAGCCA AGGCAGGACA ATAA
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Protein sequence | MAKKGFFSWF RKDKTADEID ATQNDSANEK SLAEQQAAQA ENAHLEAEQA AQAEAARLKL EQTEQAAQAE AARLKLEQAE QAAQAEAARL KLEQAEQAAQ AEAARLESEQ AEQAIQEKAA LDQIAKEQAQ ALAAAELAAK EQAQTVAEVP ENIQDEPQQK PVKEGLFARL KRGLMRTSEN IGSGFIGLFK GKKIDDDLFE ELEEQLLIAD VGVETTTKLI AKLTEHASRR QLKDAEALYD LMRDEMQKML EPVAIPLVPD NSEGPFVILM VGVNGVGKTT TIGKLAKQYQ SQGKSVMLAA GDTFRAAAVE QLQVWGQRNN IPVVAQHTGA DSASVLFDAF QAAKSRKVDV LIADTAGRLQ NKSHLMEELK KVVRVMKKLD ANAPHEVMLT LDASTGQNAI SQAQLFQEAV GVTGITLTKL DGTAKGGVIF AIADKFSIPI RHIGVGEQID DLRTFNAADF IDALFTQERV PQEKVTQESA SQAKAGQ
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