Gene Sden_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3447 
Symbol 
ID4020001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp4126617 
End bp4127054 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content45% 
IMG OID637957505 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_564445 
Protein GI91794794 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0000343048 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCGT TAATACAAAG AGTCAAATCT GCCAGCGTGC AGGTAGATGC AGAAATAGTA 
GGTAAAATTG ATAGTGGGCT ATTAGTGTTT CTGGGCGTTG AGCAGCAAGA TAATATAGAG 
GCCATGGAAA AACTGGCGAC GAAAGTTATC AGCTACCGGA TATTCAATGA TGAAAACGGC 
AAAATGAACT TAAGCCTTAA GCAAGCGGGA GGCGCATTAT TGTGTGTATC ACAATTTACT 
CTGGCGGCCG ACACGGGCAG AGGCCTTCGA CCTAGCTTTT CAAAGGCAGC GACGCCAGAA 
CAAGCCAATC ATCTTTACGA AGCCTTTATT GACTACTGTC GTCTGCAAGG AGTTGAAACC 
CAAATCGGCC GCTTTGGTGC AGATATGCAA GTGTCACTGA TTAACGATGG TCCAGTGACC 
TTTAATCTAC AAGTATAG
 
Protein sequence
MIALIQRVKS ASVQVDAEIV GKIDSGLLVF LGVEQQDNIE AMEKLATKVI SYRIFNDENG 
KMNLSLKQAG GALLCVSQFT LAADTGRGLR PSFSKAATPE QANHLYEAFI DYCRLQGVET 
QIGRFGADMQ VSLINDGPVT FNLQV