Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3391 |
Symbol | |
ID | 4019939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4046921 |
End bp | 4047838 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957444 |
Product | prepilin peptidase |
Protein accession | YP_564390 |
Protein GI | 91794739 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAT TTATCGCCCT TATGGGCCAA TATCCTGTTA TTTTTATCAG TGTTTGCTTT ATTTTTGCCG CCACCATAGG CAGCTTTCTT AACGTGGTTA TCCACCGTCT ACCTGTAATG ATGAAGCGTG AGTGGCAAGC TGAATGTAAT CAATACTTAC AAGAGTATCA CCCGGATATA GTCAAAGACG TCAGCCTGAA ACGCTTAGAA AAACCGTTAG ATAGTTTCCC CGAACGTTAT AACTTGGTAG TGCCTAATTC CTGCTGCCCT AAATGCAATG CCGCCATTAA GCCTTGGCAT AACTTACCTA TCCTTGGCTG GTGCATGCTA AAAGGAAAGT GTGCTCAGTG CCAACAGGCT ATTTCTGTAC GCTATCCCGT TATCGAACTA CTCACAGGGC TTATGGTTGC TGTCTTAGCT TGGCACTTTG GCCCTACAAG TCAGTTTTTG TTTGCCTCCC TACTGACCTT TGTCTTGATA GCATTGACTG GCATAGATCT CGATGAAATG CTATTGCCAG ACCAGCTTAC TATGCCGCTG CTTTGGCTAG GCTTGTTGAT TAATTTACAA GGCGTATTCA CAAGTCCGAC TGATGCCATC ATAGGGGCAA TTGCTGGTTA TATGAGCCTA TGGTCGGTGT TTTGGCTATT TAAACTCGTT ACGGGTAAGG AAGGCATGGG TTACGGTGAC TTTAAACTTC TGGCGGTGTT TGGCGCCTGG CTTGGTTGGC AAATGCTGCC ATTGATAATT TTACTGTCTT CATTAGTGGG TGCAGTTGTC GGGATTGCGC TGATTTTAAG TAAAAAACTC AATCAAGGAA ATCCGATCCC ATTTGGTCCT TACATCGCCA TGGCTGGTTG GATAGCGCTT ATTTGGGGCA ATGACATAGT TAATTGGTAT CTAGGCACCT TCTTGTGA
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Protein sequence | MSEFIALMGQ YPVIFISVCF IFAATIGSFL NVVIHRLPVM MKREWQAECN QYLQEYHPDI VKDVSLKRLE KPLDSFPERY NLVVPNSCCP KCNAAIKPWH NLPILGWCML KGKCAQCQQA ISVRYPVIEL LTGLMVAVLA WHFGPTSQFL FASLLTFVLI ALTGIDLDEM LLPDQLTMPL LWLGLLINLQ GVFTSPTDAI IGAIAGYMSL WSVFWLFKLV TGKEGMGYGD FKLLAVFGAW LGWQMLPLII LLSSLVGAVV GIALILSKKL NQGNPIPFGP YIAMAGWIAL IWGNDIVNWY LGTFL
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