Gene Sden_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3386 
Symbol 
ID4019934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4040468 
End bp4041049 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content49% 
IMG OID637957439 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_564385 
Protein GI91794734 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCA AGATGAATGA CGGATTGAGC TTAACTCACG GCTGGTTAAA TGAAGCGCGT 
CATTGTTTAT CGCCGCACTT TAATGCGCGC CCCAATGCTG AGGTCAGTCT GCTGGTTATT
CATAATATCA GCTTGCCAGC AGGGCAATTC GGCAAGCCTT ATATTGACCA GTTGTTTCAA
GGGTGTCTTG CCATCGATGC CGATGCCAGT TTTGCTGAGC TTGAAGGTTT GCGGGTATCG
GCACATTTCT TAATTCGCCG CGATGGCGAG CTAGTGCAAT ACGTCAGTTG TGACGATAGA
GCTTGGCATG CGGGGCTCTC TGAGTTTTTG GGTCGACAAA ATTGCAATGA TTTCGCCATT
GGCATAGAGC TTGAGGGCAC AGATTCTATC CCCTATAGCC AAGCGCAATA TCAGTGCTTA
ACTGCCTTAA CCTTGGTGTT AATGGCGCAA TACCCTATGA TTAGCCTAGA TAATATTGTT
GGTCATTGTG ATATTGCTCC CGGGCGTAAG ACGGATCCCG GTGAAAGTTT CGACTGGGCA
GCTTATCGAG CCGAATTAGG CGCGAGCTTG GCTAGACGCT AG
 
Protein sequence
MEPKMNDGLS LTHGWLNEAR HCLSPHFNAR PNAEVSLLVI HNISLPAGQF GKPYIDQLFQ 
GCLAIDADAS FAELEGLRVS AHFLIRRDGE LVQYVSCDDR AWHAGLSEFL GRQNCNDFAI
GIELEGTDSI PYSQAQYQCL TALTLVLMAQ YPMISLDNIV GHCDIAPGRK TDPGESFDWA
AYRAELGASL ARR