| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3341 |
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| Symbol | |
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| ID | 4019889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3982830 |
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| End bp | 3983447 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957394 |
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| Product | methylation |
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| Protein accession | YP_564340 |
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| Protein GI | 91794689 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000885834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTGA AACAACAAGG TTTTTCTTTG ATTGAGTTGG TCATAGTTAT CGTTATCCTT
GGCCTACTCG CGGCGACCGC CATTCCGCGT TTCTTAAACG TCACCGATGA TGCTGAAAAT
GCCAGCGTCG ATGGGGTTGC TGGTGGTTTA GCAACGGCAG TGGGTTTTGT TCGCGCCCAA
TGGGAAGTGG ACGGCAGGCG TAATAATTCG GTGATCCTCG ATGGGACGCG TATCTCTCTA
GATACTCGTT TTGGTTTCCC GACAGGCAGT ACTAATACCG ACGTGACCAG CATGTCCGAT
GCCAGTTGCC AGCAAGTGTT TAATAGCGTG CTGCAAAGTG CCCCCCGTAA CGTGCTGTAT
ACCTTAGATG CTCGCAACCA GCGTTATACA GTACGTATGC TCAATGGTGT CGGTGGTTCT
TCAACCGCTA TCGATGGCAC TACAGTCACA GGGCTGGATT TATGTGTCTA TCACCAGGTG
GCATCGCTGA TCCTGGATGA ATCGTCTGGA GTTGCCTTAC CACCACCGGA CTTAACCACC
TCTAATGCCA AAGGCTTGAC TTATAACCCT GGTACAGGTC AAGTATTAAG CTTTACTCAG
ACGCCTTTCA CACCTTAA
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| Protein sequence | MKLKQQGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAEN ASVDGVAGGL ATAVGFVRAQ
WEVDGRRNNS VILDGTRISL DTRFGFPTGS TNTDVTSMSD ASCQQVFNSV LQSAPRNVLY
TLDARNQRYT VRMLNGVGGS STAIDGTTVT GLDLCVYHQV ASLILDESSG VALPPPDLTT
SNAKGLTYNP GTGQVLSFTQ TPFTP
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