| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3333 |
|---|
| Symbol | |
|---|
| ID | 4019881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 3972832 |
|---|
| End bp | 3973716 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637957386 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_564332 |
|---|
| Protein GI | 91794681 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0190345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA TCTTTGTTCG CGGTATTTCA AACCAATCTC GGCTCACACT GGCTATTTTT
TTGTCGGTGG CCCTTATCGT GGCAAACGAT AAGTTAGAAG CTCCCCGTCA GTCCTTATCG
TCGATATTAA GTCCATTGCA GTATTTGGCC AATCTTCCCG GCCTACTCAT GGATTGGTCC
TCAGATACAC TCGCAACCCG CGACATGCTG CAAACCCAAA ATGGTGAGTT ACAGCGTCAA
CAATTGTTGA TGTCTGAACG TTTGCAACGT TTTGAACACT TGCGCCAAGA AAATGAGCGC
TTGCGTGCCT TGCTTGGCAG CCCAGTGCAG TTAGCGGTAA AAAAAGTGGT CGCCGAAGTG
ATGGAAGTGG CCAGCGACCC TTTTCGTCAT TATGTGGTAC TTAATCGCGG CGCACAGGAT
CAAGTCTATG TGGGTCAGCC TGTGGTCGAT GCCCTTGGGG TGATAGGCCA AGTGATTGAA
GTCAGCGCAC TGACCAGTCG CGTCTTGATG GTGTCAGATC CCACTCACGG CATTCCTGTG
CGAGTTACCC GAAACGATGT GCGGGCAGTG GCCAATGGCA CCGGCGAAAT TGACCAAATT
GAGCTGCGTC ATGTGGCAAA AAGTGCCGAT ATTATTGCCG GTGACCTCTT GGTCTCTTCT
GGGCTTGGCA ATCGATTTCC CGAAGGCTAC CCGGTGGCGA GGGTGATGAA GGTCTCCCGT
GATGAAGGCC AAAATTATGC GGTGATCACG GCGCAGCCGC TGGCCGCATT AGACAGAATT
CGCTATGTGT TGCTGATTTG GCCCGAAGAT TTGATAGAGA ATGAAACCCT GCTAGAAGAT
GAACAAGCAT TTAGCGGCAA GGATGTGGAG ACAAGCCATG AGTAA
|
|---|
| Protein sequence | MKPIFVRGIS NQSRLTLAIF LSVALIVAND KLEAPRQSLS SILSPLQYLA NLPGLLMDWS
SDTLATRDML QTQNGELQRQ QLLMSERLQR FEHLRQENER LRALLGSPVQ LAVKKVVAEV
MEVASDPFRH YVVLNRGAQD QVYVGQPVVD ALGVIGQVIE VSALTSRVLM VSDPTHGIPV
RVTRNDVRAV ANGTGEIDQI ELRHVAKSAD IIAGDLLVSS GLGNRFPEGY PVARVMKVSR
DEGQNYAVIT AQPLAALDRI RYVLLIWPED LIENETLLED EQAFSGKDVE TSHE
|
|---|
| |