Gene Sden_3286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3286 
Symbol 
ID4019834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3911538 
End bp3912545 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content47% 
IMG OID637957339 
Producthypothetical protein 
Protein accessionYP_564285 
Protein GI91794634 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAC ACTCTTTGTT AGTCGCAGCG CTCAGTCAGC GTGAGGCTTT TTTATCTCAA 
GCTTGCCTTG ATAATACGGA TTGCTATCGT GTTTTTCATG GCACTGTAGA AGGGATTAGC
GGCCTTAACA TAGACAGGTA TGGCAATGCT TGGTTAATTC AAAGCTTTCA TCAAAGTTTA
ACGACAGATG AGCTTGCGCT TATCACTCAG ACCTTACAGC AAGCCGTCAT GTTGCCGGTT
ATCTATAACG ACAGAGCCGC TGGCCATTCC CGTATCGACA ATGAATTAAC CCCAGAGCTG
CAACACATAG CCACCACTGA GCAAATCATC CATGAAAATG GCATTAAATT TAGCTCTAAA
CTCCGCCATG AAGGCCAAGA TCCCCTGCTG TTTCTAGACA TGCGTATTGG CCGTGAATAT
GTGCGCCAAC ACAGTAACAA CAAGACGGTA CTCAACTTGT TTTCTTACAC CTGCGGCATA
GGTACAGCGG CGGCCATGGG CGGCGCCAGT AACGTGGTCA ATGTAGATTT TTCATCATTT
GCCTTGGCGG CGGGCAAAAG AAACGCCGAG TTAAATCAAG TGGATGATGT GTGTGAATTC
ATACAAAGTG ATGCCTTTCC CGCGCTTAGG CAGCTTGCAG GGCTAAAAGT CGGCGGCAGG
CGTAACCAGA AATTGCCCAG CTACCCAAAA CTCAGTGCCA CCCAGTTTGA TTTAGTGTTT
CTTGACCCAC CAAGATATGC CAAAAGCCCC TTTGGAATAG TCGATTTAAT CCATGATTAC
CAAGGTTTAT TTAAGCCTGC CATGTTAGCC ACCAAAAGCG GCGGCACCAT AGTCTGTTGT
AACAATGTGG CCAAAGTCGA GCGCCAAGCG TGGTTTGACA GTCTCGTTCG CTGCGTCGAA
AAACAAGGCC GTAGTGTCAG TCAATGTGAG TGGCTCGATT GTCATCCTGA CTTCCCTTCT
TTTGATGGCA ATCATCCTTT AAAAATGGTC GCGCTGACAT TAAGCTAA
 
Protein sequence
MSVHSLLVAA LSQREAFLSQ ACLDNTDCYR VFHGTVEGIS GLNIDRYGNA WLIQSFHQSL 
TTDELALITQ TLQQAVMLPV IYNDRAAGHS RIDNELTPEL QHIATTEQII HENGIKFSSK
LRHEGQDPLL FLDMRIGREY VRQHSNNKTV LNLFSYTCGI GTAAAMGGAS NVVNVDFSSF
ALAAGKRNAE LNQVDDVCEF IQSDAFPALR QLAGLKVGGR RNQKLPSYPK LSATQFDLVF
LDPPRYAKSP FGIVDLIHDY QGLFKPAMLA TKSGGTIVCC NNVAKVERQA WFDSLVRCVE
KQGRSVSQCE WLDCHPDFPS FDGNHPLKMV ALTLS