Gene Sden_3268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3268 
Symbol 
ID4019816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3898948 
End bp3899637 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID637957321 
Producttransciptional regulator 
Protein accessionYP_564267 
Protein GI91794616 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000000953974 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATG AACGCATTAA ACAAAGACGC AAAGAGTTAG GCTTAACGCA GCCTTCAATT 
GCAAAAACCA TAGGCTTAAC AAAAGCCACT ATTTCGCTTT GGGAATCAGG ATCTACCTCA 
CCCAAAGGCG AGAATTTGCA CGCATTAGCT AAAGCACTTA GATGCGCCCC TGAGTTTCTT 
CTTTTTGGAA ATGATTCAAT AAAGCCTGAA CCAAACGCCG AATGGGCCGG TGGCTTTGAG 
ACATGGGGCA GTAATAGCCC GTTAGGGGAT GATGAGGTAG AAATACCGTT TTACATGGAA 
GTGGAGTTAG CCGCAGGGGA TGGCATCATA GATTGCCGTG AATACCAAGG CCCCAAGCTG 
CGTTTTGCCA AGTCAACCCT CAAGCGCCAA GGCGTGACCA GTGACCATGC AGCCTGTGTT 
AAAGTCAATG GTAACAGCAT GGAGCCGGTA CTGCCCAACG GTTCAACCGT CGGCGTAGAT 
ACCGCCCACA CAGATATTGT TGACGGGAAA ATGTATGCCA TCAATCACGA TGGCATGTTA 
AGAGTGAAAA TGCTCTACAA ACTCCCAGGC GGTGGCCTGC GCCTACGCAG CTACAACCTC 
GACGAATACC CAGATGAACG CCTCGATGCC GAAGAACTCA AACAAGTCAA AGTGATCGGC 
AAAGTGTTTT GGTACTCTGT CTTGGTGTAA
 
Protein sequence
MMNERIKQRR KELGLTQPSI AKTIGLTKAT ISLWESGSTS PKGENLHALA KALRCAPEFL 
LFGNDSIKPE PNAEWAGGFE TWGSNSPLGD DEVEIPFYME VELAAGDGII DCREYQGPKL 
RFAKSTLKRQ GVTSDHAACV KVNGNSMEPV LPNGSTVGVD TAHTDIVDGK MYAINHDGML 
RVKMLYKLPG GGLRLRSYNL DEYPDERLDA EELKQVKVIG KVFWYSVLV