Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3261 |
Symbol | |
ID | 4019809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3893477 |
End bp | 3894730 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637957314 |
Product | phage integrase |
Protein accession | YP_564260 |
Protein GI | 91794609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0304734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCTG GTGTGCAAGT GGGCAAACTC AATGATGCTG CGCTGCGGCG TTGGCTACGT GCTGGGGTGT TGCGTGATTA TCGTGATCCT CAGTTTCCTG AAATGCGGTT ACGGGCTTCG GCTGATAGGG CAAAAGCCAG TGTGTATTTG GTGATTAATG AGGGAGGGAA GACGGTGTGG CAGAAGCAGG GGGTATGGCC AAGCATGTGT ATTAAGACGT TTTTGGCTGA TTTACCTGTG ATGTTGGCTA AGCGCAGTTC GGGCGCTGAT GTGTTACGGG GTGAGTTTTT TACTGTGGCT GATTTGCTTG CTTGGTACGT GGGCCATATT GAGGTTAATT CGACCTTGAG CCGCAGCTGG TTTACTAACT GTAAGTCGAT TATCAATAGC CATTTAGCCC CTAAGCTTGG GTTGGTGACG TTGGCTGAGT TGTCTTTTGC TGTGGTGGAT AATCTGTTGG TGAAGGTGAT GATGGCTGAG GGTTATGCGG CTAATTATAT TCGTTTGTGT GTGAATGTGA TTAAGCGGGC GTTGAGTGCG GCATTGGATT TGCGGTTGTT GGTGGTTAAT CCGTTGTCTG GCTATCGGGT GACGATGAGT TTAAAGCTTT CGCCTGAGGT GGATACGCGG TTGGTGGAGT CGGATTTGGC GCCCTTGTTT GGGGCGTTGC GTGATGCGGT TATGCCGGTG GCGATGTTGT TTATGTTGAT GCTGATGTTT GGTACTCGCA TTGGTGAGAC GCGGTTGGCG CGCTGGGAGC ATTTTGCGGG CAATTATTGG TTTATTCCGG CGGCTAATGC TAAGAATCGG CAGGCGCATA GGTTGCCGCT GACCCCTACT GCTAAGGCGC TTATTGCGCA TTATTTGCAG TGGCAAGTGA AGTTTGTGGG TAAGCGGGCG TTTTTGTTTG CCGGTGATGT GGGGGCGATT AGTTTACGTA CTGCGCAGTA TTGGAGTGAG TCTATTCGGT TTAAGGATTT TACTTCGCAT GATTTACGTA AGCTTTGCCG GACCATTATT GCTGATATGG GGGTGGACAC TATGGTGGGC GAGCGTTTGC TTAATCATGC TTTGCCTGTG CTGCTGCGTA CCTATGTGCA CTCTAAGTTG GATAAGGGCA TGTTGGAGGC GCTTGATGCT TACCATGCAC ATTTAATTTC TTGCGGTTTT AATGAGGTTG CGCCCGAGAT AATCCCTAGA TCGTCGGTTG ATCGTGGGTT GGATAAAACC CTTATGGCTG CTGGGTGGCT GTGA
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Protein sequence | MASGVQVGKL NDAALRRWLR AGVLRDYRDP QFPEMRLRAS ADRAKASVYL VINEGGKTVW QKQGVWPSMC IKTFLADLPV MLAKRSSGAD VLRGEFFTVA DLLAWYVGHI EVNSTLSRSW FTNCKSIINS HLAPKLGLVT LAELSFAVVD NLLVKVMMAE GYAANYIRLC VNVIKRALSA ALDLRLLVVN PLSGYRVTMS LKLSPEVDTR LVESDLAPLF GALRDAVMPV AMLFMLMLMF GTRIGETRLA RWEHFAGNYW FIPAANAKNR QAHRLPLTPT AKALIAHYLQ WQVKFVGKRA FLFAGDVGAI SLRTAQYWSE SIRFKDFTSH DLRKLCRTII ADMGVDTMVG ERLLNHALPV LLRTYVHSKL DKGMLEALDA YHAHLISCGF NEVAPEIIPR SSVDRGLDKT LMAAGWL
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