| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3232 |
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| Symbol | |
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| ID | 4019761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3866061 |
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| End bp | 3867044 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957285 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_564231 |
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| Protein GI | 91794580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCTA GCACCTTCTC CATCGCGCCT ATGCTGGATT GGACGGATAA ACATTACCGC
TACTTTGCCC GCATTATGTC TACTAAGGCG CTGCTTTATA CTGAGATGGT GACGACTGGG
GCGATATTGC ATGGCCGTGG GGATTATCTT GCCTATAACA CAGAGGAGCA TCCGCTGGCG
TTGCAGCTGG GTGGCTCAAA CCCTGTGGAT CTTGCCGCTT GCGCTAAGCT TGCCTTTGAA
CGGGGTTATG ATGAAATCAA TCTGAATGTG GGTTGCCCGT CAGACAGGGT TCAAAATGGC
CGTTTTGGGG CCTGCTTGAT GGCAGAGCCT GAGCTCGTGG CAGAGTGTGT CGATGCCATG
AAACAAGTGG TTGATATTCC GGTGACAGTG AAAACGCGGA TCGGTATCGA TGAGCAGGAC
AGCTATGAGT TTTTAACCAA ATTCATTGAA ACCGTGGCGG CTAAAGGCTG TGATGATTTC
ACTATCCATG CTCGTAAAGC CTGGCTACAG GGCCTGAGTC CAAAAGAGAA TCGTGAAATT
CCGCTATTGG ATTACGATAG GGTTTATCAG CTTAAACGAG ATTTTCCCAA GCTTAATATT
GGCATCAATG GCGGCATCAA GACCTTAGCC GAGGCCAAAC TGCATTTAAC TCAGCTCGAT
GGGGTGATGG TGGGCCGGGA AGCCTATCAG AATCCGTACC TATTGGCCGA GGTGGACACA
CAATTGTATG GTGTAAAGCG TGACATCATC AGTCGTGAGC AGGTGATTGA GAAGATGCTG
CCTTATATTG AAGCCCACTT AAAGACCGGT GGCCGCTTGA ATCACATCAC TCGCCACATG
ATAGGGTTAT TCCAAGGCTT GGCGGGTTCT CGCCAATGGC GCCGCCATTT AAGTGAGAAT
GCCCACAAGC CTAATGCGGG GATTGAAGTG GTGCGCGAGG CCGTGATTAA GATGCACACT
ACTGCAGAGT CGATGCAAGA TTAA
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| Protein sequence | MAASTFSIAP MLDWTDKHYR YFARIMSTKA LLYTEMVTTG AILHGRGDYL AYNTEEHPLA
LQLGGSNPVD LAACAKLAFE RGYDEINLNV GCPSDRVQNG RFGACLMAEP ELVAECVDAM
KQVVDIPVTV KTRIGIDEQD SYEFLTKFIE TVAAKGCDDF TIHARKAWLQ GLSPKENREI
PLLDYDRVYQ LKRDFPKLNI GINGGIKTLA EAKLHLTQLD GVMVGREAYQ NPYLLAEVDT
QLYGVKRDII SREQVIEKML PYIEAHLKTG GRLNHITRHM IGLFQGLAGS RQWRRHLSEN
AHKPNAGIEV VREAVIKMHT TAESMQD
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