| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3206 |
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| Symbol | miaA |
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| ID | 4019732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3839547 |
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| End bp | 3840446 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957256 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_564205 |
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| Protein GI | 91794554 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.413046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTTTAA TGGGGCCAAC GGCTTCAGGA AAAACGGCTT TGGCCATTGA AATGGCGCAA
AAGCACAATT GTGAGATTAT TTCTGTCGAC TCGGCATTGA TATACAAGCA GATGGACATA
GGCACAGCGA AACCCAATGC TGCCGAGCTT GCGCTGGCGC CACATAAATT GATCGACATT
TTAGACCCAA GCGAGAGCTA TTCTGCAGCG GATTTTAGGC GGGATGCTTT AATCGAGATT
GAAGCGATTA TCAAAAGAGG CAAGACGCCA CTTTTGGTGG GCGGCACCAT GATGTATTTC
AAAGCCTTGC TGGAAGGTTT ATCCCCCCTG CCAAGCGCCG ATGAAACCAT ACGCCAACAA
ATACAAACCC GTGCCGATAT TGAAGGCTGG GAAGCTCTGC ACCAAAGTCT GTGTGAGATA
GACCCGGTCG CAGGAGCAAG GATACACCCG AACGATCCCC AGCGGTTATC GCGGGCGTTA
GAAGTTTATT ACATTAGTGG CAAGACAATG ACTGAGTTAA CTCAGACTAA ATCAGCCGCT
TTACCCTATG AAGTCGTGCA GTTTGCGATA GCACCACTTG ATAGGAAAGT ACTACATGAA
TTAATTGCGA AACGCTTTAC AATCATGCTC GAGCAAGGCT TTGTCGAGGA AGTTAACAGC
TTGATGGCAC GAGGAGATTT GCATTTAGAC TTACCTTCTA TGCGCTGTGT GGGGTATCGT
CAGTGTTGGC AATACCTTGA AGGTGAGTTT GACTATGACA CTATGGTTGA AAAAGCGACC
GCTGCTACTA GGCAATTGGC TAAACGTCAA TTAACATGGT TGCGTGGTTG GCCTGATGTG
CATTGGCTAG AAAGTGGTGC AGAAAGTAAT TTAGTTACAC TTCAAAGGCA AAGGGGCTAG
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| Protein sequence | MFLMGPTASG KTALAIEMAQ KHNCEIISVD SALIYKQMDI GTAKPNAAEL ALAPHKLIDI
LDPSESYSAA DFRRDALIEI EAIIKRGKTP LLVGGTMMYF KALLEGLSPL PSADETIRQQ
IQTRADIEGW EALHQSLCEI DPVAGARIHP NDPQRLSRAL EVYYISGKTM TELTQTKSAA
LPYEVVQFAI APLDRKVLHE LIAKRFTIML EQGFVEEVNS LMARGDLHLD LPSMRCVGYR
QCWQYLEGEF DYDTMVEKAT AATRQLAKRQ LTWLRGWPDV HWLESGAESN LVTLQRQRG
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