Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3205 |
Symbol | |
ID | 4019731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3839194 |
End bp | 3839463 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957255 |
Product | host factor Hfq |
Protein accession | YP_564204 |
Protein GI | 91794553 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.148283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGACCCA TTTTTGAACG CTTTGCGTCG TGAACGTGTA CCAGTATCAA TTTACTTGGT CAACGGGATC AAACTACAAG GTCAGGTTGA GTCTTTCGAT CAATTTGTGA TCTTATTGAA AAACACAGTA AGCCAGATGG TTTACAAACA CGCCATTTCT ACCGTGGTGC CGGCACGTGC ATTGCACATA ACGCCGACCC AAAGTAGCCA GCCTGGCTAT GTTCAGCATG ACGATGCGCC TGCTGAATAA
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Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS TVVPARALHI TPTQSSQPGY VQHDDAPAE
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