| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3203 |
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| Symbol | |
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| ID | 4019729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3836670 |
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| End bp | 3837830 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637957253 |
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| Product | HflK protein |
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| Protein accession | YP_564202 |
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| Protein GI | 91794551 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.143701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA ATGAGCCCGG TAACAAGGGT AAAGACCCTT GGGGAAATAA AAGTAACAAC
GATAAAGGAC CACCGGATTT AGACGAGGTG TTTCGTAACT TATCGAAGCG ATTTGGCGGC
GGTGGCAAAG GTGATGGTGG CTCAGGCGCC TCATTTAGCA CCGCAGGCTT TGTCATTTTT
GCGGTTATCG CTTTGGTTGT TTGGGCCGCA TCAGGTCTTT ATACCATTAA GGAAGCTGAG
CGCGGCGTGA TGTTGCGTTT CGGGCAGTTC CAAGAAGAAG TGGGCCCTGG TCTACATTGG
AAAGCCACCT TCATCGATAA AGTGTACCCT GTCGATGTTG AGACTGTGCG TTCCGTCCCT
GCTTCTGGCA GCATGTTAAC CTCAGATGAA AACGTCGTTA AAGTCGAATT AGATATTCAA
TACCGTGTGC TAAATGCGTA TGAGTACTTA TTCAGCGCGG TCGATGCCAA TGAGAGCTTA
CGTGAAGCCA CCGACAGTGC CCTACGTTAC GTTGTGGGCC ACAATCGCAT GGATGACATC
TTGACCACTG GTCGTGATGC TATTCGCCGC GATACTTGGA AGGAACTTGA ACTTATTCTT
GAACCTTACA AGTTAGGCTT AGTGATTGTC GACGTCAACT TCTTACCGGC GCGTCCACCA
GAAGAAGTGA AAGATGCGTT CGATGATGCG ATTTCAGCTC AAGAAGATGA ACAGCGTTTC
ATTCGTGAAG CCGAAGCTTA TGCCCGTGAA ATAGAACCTA AGGCTCGTGG TGAAGTGCAG
CGTATGTTTC AGCAGGCAAG CGCGTATAAA CAGCGTGAAG TGTTAGAGGC CCGAGGTAAA
GTGGCTCGCT TTGAGAAACT GCTCCCTGAA TACAAGGCTG CACCTGAAGT GACTCGTAAT
CGTTTATACA TAGATGCGAT GCAGTCAGTA TTCGCTGATA CGAATAAGGT ACTCATAGAC
ACTAAAAATA GTGGCAACAT GATGTATCTA CCTTTAGATA AGATGATGAA TCAAGGATCA
AAAACTCGGC CTAATAGCGC TAAAGTTGAC ACCCATGTAA ATTCTTTATC TAGTGGTGTT
AACAGTTCAA ACTCTAGTAA TAGCATGAGC TTAGACGGGC GTATGCCTCG CGAAGCTCGT
ACTCGCCAAG GGAGGGAGTA A
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| Protein sequence | MAWNEPGNKG KDPWGNKSNN DKGPPDLDEV FRNLSKRFGG GGKGDGGSGA SFSTAGFVIF
AVIALVVWAA SGLYTIKEAE RGVMLRFGQF QEEVGPGLHW KATFIDKVYP VDVETVRSVP
ASGSMLTSDE NVVKVELDIQ YRVLNAYEYL FSAVDANESL REATDSALRY VVGHNRMDDI
LTTGRDAIRR DTWKELELIL EPYKLGLVIV DVNFLPARPP EEVKDAFDDA ISAQEDEQRF
IREAEAYARE IEPKARGEVQ RMFQQASAYK QREVLEARGK VARFEKLLPE YKAAPEVTRN
RLYIDAMQSV FADTNKVLID TKNSGNMMYL PLDKMMNQGS KTRPNSAKVD THVNSLSSGV
NSSNSSNSMS LDGRMPREAR TRQGRE
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