| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3202 |
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| Symbol | |
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| ID | 4019728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3835770 |
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| End bp | 3836666 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957252 |
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| Product | HflC protein |
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| Protein accession | YP_564201 |
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| Protein GI | 91794550 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.11004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAGAT TTGGATTAGT GATATTAGTC GCTGTTTTAG GTTTAAGCTT ATCGTCTGTT
TTTGTGGTAA GCGAAGGCGA ACGCGCTATT GTTTCTCGCT TTGGTAAAGT GCTTAAAGAT
GACGTTGATG GCAAGGAAGT CACCCGTGTG GTGTCTCCAG GCTTACATTT TAAAATTCCA
GCGATAGACA AAATTCGTCA TTTAGATGCG CGAATTCAGA CCTTAGATGG CGCCGCTGAC
CGCTTCGTGA CATCAGAGAA AAAAGATTTA ATGGTCGACT CTTATGTGAA ATGGCGTATC
CGTGATTTTG AAAAATATTA CCTGTCGACT AACGGCGGTA TTAAAGCCAA TGCAGAAAGC
TTGCTGCAGC GCAAAATCAA CAACGACTTA CGCACTGAGT TTGGTCGCCG TACCATTAAG
GAAATTGTTT CTGGCAAGCG TGATGAGCTA CAGACTGATG CCTTAGAGAA TGCCTCTGAA
AGTGCGAAAG ACTTAGGCAT TGAAGTGGTT GATGTGCGTG TTAAGCAAAT TAACTTACCG
GCTAACGTCA GCAACAGTAT TTATCAGCGT ATGCGCGCCG AGCGTCAAGC CGTGGCAAAA
GAGCATAGAG CGCAAGGTAA AGAGCAGTCT GAAATCATTC GCGCCACTAT AGACGCTAAT
GTGACAGTAA AAATTGCTGA AGCTGAGCGT AAAGCGCTGA CTGTTCGTGG TGAAGGTGAT
GCATTAGCGG CTAAGATTTA TGCCGATGCT TACAGTAAGG ATGCTGAGTT TTACAGCTTC
TTACGTAGTT TAGAGGCTTA CAAAGAAAGC TTTGCTGGCA ACAATGACAT CATGGTGCTC
GAGCCTGATA GTGATTTCTT TAAATACATG AAATCAGTGA CTGGCAAAGG CAACTAA
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| Protein sequence | MGRFGLVILV AVLGLSLSSV FVVSEGERAI VSRFGKVLKD DVDGKEVTRV VSPGLHFKIP
AIDKIRHLDA RIQTLDGAAD RFVTSEKKDL MVDSYVKWRI RDFEKYYLST NGGIKANAES
LLQRKINNDL RTEFGRRTIK EIVSGKRDEL QTDALENASE SAKDLGIEVV DVRVKQINLP
ANVSNSIYQR MRAERQAVAK EHRAQGKEQS EIIRATIDAN VTVKIAEAER KALTVRGEGD
ALAAKIYADA YSKDAEFYSF LRSLEAYKES FAGNNDIMVL EPDSDFFKYM KSVTGKGN
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