| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3188 |
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| Symbol | |
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| ID | 4019714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3820279 |
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| End bp | 3821151 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957238 |
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| Product | phosphoribulokinase |
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| Protein accession | YP_564187 |
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| Protein GI | 91794536 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3954] Phosphoribulokinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000476604 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAA AACACCCTAT CATAGCTGTC ACAGGCTCCT CTGGGGCAGG TACAACCACT
ACGACCACGG CCTTTAGTCA TATTTTTAGG CAACTTGGGA TCAATGCCGC TTTTATCGAA
GGCGACAGTT TTCACAACTT CACTCGCGCC GAGATGGAAG TGCTTATTCG TAAGTCCAAA
GCCGAAAACC AAAACCTGAG TTATTTTGGC TCCCAAGCCA ACGACTTCCC AAAACTGGAG
GAGTGCTTTC GTACCTATGG TGAAAAAGGC CAAGGGCTGA CACGAAGCTA CCTGCATACG
TTCGATGAAG CCGTGCCTTT TAACCAGATG CCAGGCACCT TCACCCAGTG GCGGCCGCTG
CCAGAGAATA CCGATATCCT TTACTACGAA GGCCTGCATG GTGGCGTTGT GACCGAAGAT
GCCGATGTAG CCAAGCATGT GGATTTACTT ATTGGTATGG TGCCAATCGT GAATTTAGAG
TGGATCCAAA AAATTATCCG AGACACTTCA GAGCGAGGCC ACAGCCGCGA GAAAGTTATG
GGTTCCATAG TGCGCAGCAT GGATGATTAC ATCACCCATA TGACGCCGCA ATTCTCCCGC
ACTCACATCA ATTTCCAGCG GGTGCCCACG GTCGATACCT CCAACCCTTT TAGCGCTAAA
GACATCCCAA GCCTAGATGA AAGCTTTGTG GTGATCCGTT TTCGCGGCAT GAATAACGTC
GATTTTCCGT ATTATTTAAG CATGCTGCAG GGATCGTTTA TGTCTAGGGT CAATACCATG
GTGGTACCTG GCGGTAAAAT GTCTTTGGCC ATGGAGTTGA TTTTAACCCC ACTTATCAGA
GATTTAATGA ATAAAAAACT CGCGCAGCAA TAA
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| Protein sequence | MSAKHPIIAV TGSSGAGTTT TTTAFSHIFR QLGINAAFIE GDSFHNFTRA EMEVLIRKSK
AENQNLSYFG SQANDFPKLE ECFRTYGEKG QGLTRSYLHT FDEAVPFNQM PGTFTQWRPL
PENTDILYYE GLHGGVVTED ADVAKHVDLL IGMVPIVNLE WIQKIIRDTS ERGHSREKVM
GSIVRSMDDY ITHMTPQFSR THINFQRVPT VDTSNPFSAK DIPSLDESFV VIRFRGMNNV
DFPYYLSMLQ GSFMSRVNTM VVPGGKMSLA MELILTPLIR DLMNKKLAQQ
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