Gene Sden_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3173 
Symbol 
ID4019699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp3806650 
End bp3807132 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content49% 
IMG OID637957223 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_564172 
Protein GI91794521 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0349963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGG TGTATATCGC CCTTGGTGCG AATCTAGACG AGCCACTACA GCAGCTTAAC 
CATGCCAGCA AGGCATTGGC TAAGCTTGCC GAAGGTGACA GCCTTAAGTT GTCACCTTTT 
TATCGCTCTG TCCCCATGGG GGATATTCCC CAAGCTGAAT ACTTCAATGC CGTAGCAAGT 
CTACGCACGT CATTGTCTCC GATAGCATTA TTGGACGCAC TGCAAGCCAT AGAGTTAGCT 
CAAGGCAGGC AAAGACTGGT GCGCTGGGGA CCCAGAACCT TAGACTTAGA TTTACTACTA 
TATGATAACC TCTGTCTTGA TACTGACAGG CTTATTCTGC CTCATTACGG CATGAAACAA 
CGCAGCTTCG TACTGGTGCC TCTATTTGAT ATCGCCCCTG AGTTAACCCT GCCTTGTCAG 
ACTCCGCTGA GGGAGTTGAT AACCCCTGCA ATGCGTGATG AATTGCAAAT CCACCTACAG 
TAA
 
Protein sequence
MALVYIALGA NLDEPLQQLN HASKALAKLA EGDSLKLSPF YRSVPMGDIP QAEYFNAVAS 
LRTSLSPIAL LDALQAIELA QGRQRLVRWG PRTLDLDLLL YDNLCLDTDR LILPHYGMKQ 
RSFVLVPLFD IAPELTLPCQ TPLRELITPA MRDELQIHLQ