| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3169 |
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| Symbol | |
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| ID | 4019695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3802858 |
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| End bp | 3803574 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957219 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_564168 |
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| Protein GI | 91794517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000829212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATACT CCCCTAATTT GGCTCACGGT ACTTTGTTAA GACGTTACAA GCGCTTCCTG
GCCGATGTAC TGCTGGACGA TGGCACAGAA ATCACGCTGC ATTGCCCCAA TACGGGTTCG
ATGAAAAACT GCCTGTTTCC CGGTGAAACT GTGTGGTTTT CAACATCAAA CAACCCTAAG
CGTAAATATG CCCACACCTG GGAGCAAAGC AGCACCCCTG ACAAGCAGTT AATCGGCATC
AATACCGGCC GCGCTAACGC CTTAGCAGAA GAGGCCATCA ATCTTGGGGT GATCAAAGAA
TTGACTGGCT ATGACAGGCT ACAGCGTGAA GTCAAATATG GTGAAGAAAA TAGCCGCATC
GATATCCTGC TTAGCAGTGA CACTCGAGCA AGCTGTTATA TTGAAGTTAA AAGTTGTACC
TTATTAGAAG AGGGTTCAAC GTCAGGCAGA GGATATTTTC CAGACTCTGT GACTGTCCGA
GGCCAAAAAC ACTTACGTGA ACTTATTCAC ATGGTAAAAC AAGGACATAG GGCGGTATTA
CTTTTTGTAG TTCAGCACTC AGGTATTAAC AGCGTAAGCC CTGCAAGGCA TATAGATGTA
GCCTATAGCG AATTATTCAC TCAAGCGCTC GACGCGGGAG TCGAAGTATT AGCCTATCAG
ACACAAATGT CGCCTCAGGA AAGTCAAATA CTGACTTCTT GCCCTGTGAT AACTTAA
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| Protein sequence | MQYSPNLAHG TLLRRYKRFL ADVLLDDGTE ITLHCPNTGS MKNCLFPGET VWFSTSNNPK
RKYAHTWEQS STPDKQLIGI NTGRANALAE EAINLGVIKE LTGYDRLQRE VKYGEENSRI
DILLSSDTRA SCYIEVKSCT LLEEGSTSGR GYFPDSVTVR GQKHLRELIH MVKQGHRAVL
LFVVQHSGIN SVSPARHIDV AYSELFTQAL DAGVEVLAYQ TQMSPQESQI LTSCPVIT
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