Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3114 |
Symbol | |
ID | 4019640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3742648 |
End bp | 3743751 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637957165 |
Product | Rieske (2Fe-2S) region |
Protein accession | YP_564114 |
Protein GI | 91794463 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGCAA CCCACTCTCT TGCGCCAGAA TGTTATTTCG ACGAACAGCT TTTTTTAAAA GAAAAAACTG AAGTTTTTGA AAAAAATTGG ATTTTTGTAG GTTTTAGTGA ACAACTCGCC AATAATCATG ACTTTATTAC TACTCAGATT GGCGATAAAT CTGTAGTTGT TCAAAATTTT GGTGGTAGTA TCAGTGCTCT GCTTAATGTT TGTAGTCACA GAAAAGCGAC ACTACAGACA CTATCGAATG GCAATAGACC CTTAGTCTGC CCATACCATT GCTGGAGTTA TAAAAAAGAT GGTCAGTTGT CAGGTGTCCC TCTCAATCGC ACTGATTTCG GGTTGGATGA TGCGGGGAAA AAAGCCTTAT CACTTAGGCA GTTTGCTTTA GAAACATGTG GGAGAATGCT GTTTGTTCGA GTGGCCAAAG ACGGGCCGAC ACTGAGCGAA TTTCTTGGTC CATATTTTGA TATTTTAGAA CAAATTTCAA CTTCTTTTAT TGAACCCGTT CAACAAGACA CCTTTGAGTG GAATACTAAT TGGAAAATAG CATGCGAGAC CGTCTTAGAG GTTTACCATG TTACAGGTGT GCATCCTGAA ACCTTCGCTA AATTTGCGAA AGCAGAGTGC GAAATTAACT TTTTTGATGG GCATAGCACA GGTAATACTC CCCTACACGA TGAACCTAAA AAGTGGTGGA ATGGTGCAAG AAAACATTTG AAGTTTGAGA AGCATGCTTA TTTTAAAGAA TACAATCATT ACTTTATTTA CCCTAACTTA GCGATAGGCT TAACGGATGG TTCTTTGATG TCTTTGCAAA CTTATCAACC GGTAACTGCC ATAAGTAGTA AGTTACATTT TCAGTTAAGA ATGATGAGCT CTGCTGAAAA TGCCAGAGTG AGTGATGCAG TTAGGGCTGC GATAAAAGCA AATTTTACAG AATTTAATAA AATAATATTA AATGAAGATA AGCTCGTAGC TGAATCTTGC CAAGTTAATA TGAGCAGTAA TAATATTCCT GGTTTACTAG GAAAATGTGA AGATAGAATT CGTCATTTCC ATAGCGCTTG GCGTGAAGAT ATGCAATATC AACAGGAAAG TTAA
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Protein sequence | MIATHSLAPE CYFDEQLFLK EKTEVFEKNW IFVGFSEQLA NNHDFITTQI GDKSVVVQNF GGSISALLNV CSHRKATLQT LSNGNRPLVC PYHCWSYKKD GQLSGVPLNR TDFGLDDAGK KALSLRQFAL ETCGRMLFVR VAKDGPTLSE FLGPYFDILE QISTSFIEPV QQDTFEWNTN WKIACETVLE VYHVTGVHPE TFAKFAKAEC EINFFDGHST GNTPLHDEPK KWWNGARKHL KFEKHAYFKE YNHYFIYPNL AIGLTDGSLM SLQTYQPVTA ISSKLHFQLR MMSSAENARV SDAVRAAIKA NFTEFNKIIL NEDKLVAESC QVNMSSNNIP GLLGKCEDRI RHFHSAWRED MQYQQES
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