Gene Sden_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3109 
Symbol 
ID4019635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3739127 
End bp3739696 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content36% 
IMG OID637957160 
Productacetyltransferase 
Protein accessionYP_564109 
Protein GI91794458 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGA ATTTTAAGCG CGTAACTCAA GATGATGCAG AGCTTTTACT TAAATGGCGA 
ACTTCAGCCG AAATAACTAA GCATATGTTT ACAGATCTTG AAAATCCAAC CACAGAAAAG
CAGCGAACTT GGATAGCTTC TCTTGAAAAT AGGGAGGACT ACCGAGGTTA TATGATCCAG
GATGATGGTA TTTCTATCGG TTTCCTTTGT TTTAATGAGA TAGACAAAAT TAATCAGCGC
TGCAGTACGG GGTCTTATAT TTATGAGCGA GAAGCAAGAG TTAAGTATGG TGTTACGATG
CACACCTATA TCTGTAATTA TGTTTTTCAT CACCTTAAAC TGAATAAAGT TGTGAATTTA
GTACTAGACG CGAATGAGAA GGTCGTCAAA TTGCAGCTAT TACATAAGAC GCGTTTAGTA
GGGTATTTAA AGCAGCATAT TTATAAAAAC GGTCAGTTTT TAGACTTGTA TATCTTTGAG
TTACTGAAAG ATGATTGGGC TAATCAGAAG CAACATTTTG ATTTAGCTAA GATAGCAACA
GCATTTAATG ATTGGGGAAT CCATGACTGA
 
Protein sequence
MALNFKRVTQ DDAELLLKWR TSAEITKHMF TDLENPTTEK QRTWIASLEN REDYRGYMIQ 
DDGISIGFLC FNEIDKINQR CSTGSYIYER EARVKYGVTM HTYICNYVFH HLKLNKVVNL
VLDANEKVVK LQLLHKTRLV GYLKQHIYKN GQFLDLYIFE LLKDDWANQK QHFDLAKIAT
AFNDWGIHD