| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3097 |
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| Symbol | |
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| ID | 4019623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3720563 |
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| End bp | 3721792 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957148 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_564097 |
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| Protein GI | 91794446 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAC ACTCGCTTGA CAAGGATAAA ATCAAAATCC TGCTGTTGGA AGGCGTACAC
CAGACAGCAA TAGACGTATT GGAGCGAGCG GGTTACACCA ATATTGAATA TCATAAGGCG
TCTCTCAGTG ATGAGGCCCT AAAAGATGCC ATAAAAGATG CCCATTTCGT CGGCCTACGC
TCTCGCACTC AAATCACAGC ATCTGTATTG CAACAAGCTG AAAAGTTAGT TGCCATTGGC
TGCTTCTGCA TTGGCACCAA TCAGGTTGAT ATCGATGCCG CAGAAAAGCT GGGCATTCCT
GTGTTTAATG CACCTTTTTC AAATACTCGC TCAGTAGCAG AGCTAGTACT TGGCGAAATC
ATTATGTTGA TGCGCGGTAT TCCCCAGCGC AATGCCCATG CTCACCGAGG AGGCTGGCTT
AAAAGCGCTA ATGGCAGCTT CGAAGTCAGG GGAAAAACAC TAGGCGTCAT TGGTTATGGC
CATATTGGCA CTCAGCTAGG TATTTTGGCT GAGACTTTGG GCATGCGAGT GGTATTTTTC
GACATCGAAG ATAAGCTCCC CCTAGGTAAC GCCGTGCAAA TTCACTCCAT GGAAGCGTTA
CTCGCACAGG CAGATGTCGT CACCTTACAT GTGCCAGAAA CCCCGCAAAC AAAAGACATG
TTTGCTGCTG AAGAATTTGC CATGATGAAA AAGGGCGCTA TCTTTATTAA TGCTTCCCGT
GGCACTGTAG TGGATATCGA CAACCTCGCT AATGCCCTTA AGTCTGAGCA CCTTGCAGGC
GCGGCTATCG ACGTGTTTCC CGTCGAGCCA CAATCCAATG ATGATGAATT TCAAAGTCCG
CTACGCGGCT TAGATAATGT CATCCTCACC CCGCATATTG GTGGTAGTAC CGCTGAAGCA
CAGGAAAACA TCGGTATTGA AGTGGCTGGT AAGTTGGCTA AATATTCAGA CAATGGCTCT
ACCTTGTCTG CGGTAAACTT CCCCGAAGTC TCCTTGCCAC AACACAAGGG CACTTCGCGG
TTATTACACA TTCACCACAA CCGTCCAGGG GTGTTAATTA AGATTAACCA AGCGTTTTCT
GAGAAAGGCA TCAACATCGC GGCCCAGTAT CTGCAAACAA CCGCTGTCAT AGGTTATGTG
GTAATGGAAG TTGACTCAGA TCAAGCCGAA GAGGCTCTAG TCGAACTTAA GGCAATTGAC
GGCACCATTC GCACTCGCGT CTTATTCTAG
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| Protein sequence | MAKHSLDKDK IKILLLEGVH QTAIDVLERA GYTNIEYHKA SLSDEALKDA IKDAHFVGLR
SRTQITASVL QQAEKLVAIG CFCIGTNQVD IDAAEKLGIP VFNAPFSNTR SVAELVLGEI
IMLMRGIPQR NAHAHRGGWL KSANGSFEVR GKTLGVIGYG HIGTQLGILA ETLGMRVVFF
DIEDKLPLGN AVQIHSMEAL LAQADVVTLH VPETPQTKDM FAAEEFAMMK KGAIFINASR
GTVVDIDNLA NALKSEHLAG AAIDVFPVEP QSNDDEFQSP LRGLDNVILT PHIGGSTAEA
QENIGIEVAG KLAKYSDNGS TLSAVNFPEV SLPQHKGTSR LLHIHHNRPG VLIKINQAFS
EKGINIAAQY LQTTAVIGYV VMEVDSDQAE EALVELKAID GTIRTRVLF
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