| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3069 |
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| Symbol | |
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| ID | 4019595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3686388 |
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| End bp | 3688880 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957121 |
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| Product | hypothetical protein |
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| Protein accession | YP_564070 |
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| Protein GI | 91794419 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATAA GAAAGAGCTT TGCTGCGTTT GTCGTACTCA TCAGCGCCAT AAGCCTTTCG
GCTTGTAATG GCGCCTCAGA AGATAGTTCA AGCACGCCCA CTGGCGCCCT AAGCATTAAC
TTAAGCTTTG CAACCGCAAG CAATGGCCAA TGTGGTGACG TCACCACACG TCAAAGCTTC
ACCAGTGTTG AAAGCTTTTG TGCCATAGCT CAAGTAAAAC AAGGCGATGC TAATTTATCT
GGTGCCATTG TCGAATTTAT CGCCAGCATT GGTGCTGCTG CCCCGGCCTC TAAACTCACA
GATGCTAATG GTCAGGCGAC AGCCATTATT TCATTAAACG CCGCGGTGCC CAGTGCCGGC
ACACTGAGTG TCATGTATGC GCCAGCAGGC GCTGACAGTG TCAGTGCTAG CCGCAGTTAT
GAATTTATTC AATCCACTGT GAATTTGCCT GAAAATACCA GCTTAATGAA TGGGGTATTT
AAAAATGGTT TCTCTGTCGC CCAATTCAAA ATTGGCGAAA CCGTCGAGTT ACAAGCAAGG
TTACTGGATG GCTCAAGCCA AGGGGTTGCT AATCAGATAG TGACTTTTCA AGCAGGCAAC
GCCAACCTAG CACCTAATAC CTCACTCACT GACACCCAAG GCATAGCCAA ACTCAGCTAC
ACACCTACGG TCGCTGAATT GGGCGCATAC TCCTTAGTCA CAACTACAAA TTACCAAGGT
ACAACACTCA GCCGTAGCAG TAATTACCAG GTAGTCAGTG CCGATGCTAT CGCCCTAGGC
ACAGTCAAAC TGGGCCATTT CGACAGTAAT AATCAGTTCA TTGAAGGTAA ACTCGGTACC
AGTCTAATTG CAGATCAAGA TGGCAAATAC CAAATCAGTG CAGGCGGTAG CTTTGGTGTG
AACGCAAGTT TAGTCCTCGA GGATACCAGT GGCGCTATTA GCCGCCTACA AAGCCCTTAC
AGCGTAGTAT TTAGCTCTGA CTGTGGTGCT AACAACCTAG CAAGCCTTGA TTCTCCTGTG
ACTACCCTTT CAGGCACCGC AGGCGCAACC TTCCAAGACA TTAATTGCAG CGGTAACAGT
GAGCGCAGTG ACAGCATCAC GGCCACGGTA CAAGTCGATG GCTCAGTGTT AACTGCGAGT
TTAGATTTTA CCTTAGCTCG TCAAACTTTA GCCAGTTTAA GCTTCGTCTC GGCTACACCT
TCAAGCATTC GCATTAAAGG CAGCGGCGGC ACAGGTTCAA CGGAGTCATC ACTGGTCACC
TTTTTAGTGA CCAGCGCCAA TGGTCAACCC ACGGCGCAGC AACAAGTGGA TTTCAGCCTA
GACACTGTCA TTGGCGGGCT TACCTTCGCT AATGCCTTGG CCAACCAGCC ATCGAAAGCC
AGCAGTATCA CTAATGCCAA TGGCTTAGCC ACGGTACGAA TACAAGCTGG CACAGTACCG
ACTCCAGTTA GGGTCACAGC TACTGCCACA GATAAAGACA CCAATGAAAT CATCACCAGC
CAGTCTGAGC AGTTAACTGT GAATACTGGC TTGCCGCAAC AACTGGGCTT TAGCATTGCA
GCAAGCACTT TCAACCCTGA AGCGGCTGCT TATAATGGTG AAAAAGTGAC TATCACTATT
TACGCCTCAG ACAGTTTTGG TAATCCAGCC CCCGATGACA CTACGGTTAA CTTTACCGCA
GAAGGCGGGC AAATTGAGCC TTCATGTTTG ACCAATAATG GCAGTTGCTT TGTCACTTGG
ACCTCAACAG CGCCGCGAGT AAGCGATCAT CGAATCACCA TATTAGCCTA TGCACTCGGT
CATGAAACCT TCTTCGACAC AAATGGTAAT AACCAATTCG ATGCCGCAGA CGGCGGCGCT
ATCACCCATG CCTGTGTTAA CTCGAATAAT CTTGCCGTCG CCTGTACCGG CAACGGTATG
GATATCGAGA CCTATCACAA TAGCGGTTTT AGTGACTTAG GCGATGCCTT CAGGGATGAT
AATGAAACCG GCGTCTACGA AGCTGGCAAG CCCTATTTTA ATGCCCAAGC AAAAACCGCT
TATTCAGGTC CAGATGGTAA GTTCAATGGT CCCCAGTGTA CGGGTAGCCT TTGTGGAACA
GGCCAAGCCA ATAAGACTTA CATACGTAAG GCTTTAGTGC TGACCATGTC TGGCTCCCAA
GCAAACTTCA TCATCAAGCA AGATGGAGTA GTGATTAATG ATTTCAACAC AGATATCAGA
CCAATCCCTG CTGCCGGTCG TTCACATTTT AGTGTGCAAC TATTTGATAG TGCCAATCAA
ATATTACCAG CTCAAACAAC ACTCGATGTA GAAGCAAGCG AAGGTGACGC GATATTTAAT
GGCCATACTG TGCCTAATAC CACAAGAGCG GGCGGCACCA ACACAGAGTT CACCTTAGTC
AATACCGCCA CGGGCACCAG CACAGTGACA TTGACAGTTA CCACCCCTAA AGGTGTCGCG
ACGCAATTAA CCTTCAATGT GCCCTTGCTC TAA
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| Protein sequence | MLIRKSFAAF VVLISAISLS ACNGASEDSS STPTGALSIN LSFATASNGQ CGDVTTRQSF
TSVESFCAIA QVKQGDANLS GAIVEFIASI GAAAPASKLT DANGQATAII SLNAAVPSAG
TLSVMYAPAG ADSVSASRSY EFIQSTVNLP ENTSLMNGVF KNGFSVAQFK IGETVELQAR
LLDGSSQGVA NQIVTFQAGN ANLAPNTSLT DTQGIAKLSY TPTVAELGAY SLVTTTNYQG
TTLSRSSNYQ VVSADAIALG TVKLGHFDSN NQFIEGKLGT SLIADQDGKY QISAGGSFGV
NASLVLEDTS GAISRLQSPY SVVFSSDCGA NNLASLDSPV TTLSGTAGAT FQDINCSGNS
ERSDSITATV QVDGSVLTAS LDFTLARQTL ASLSFVSATP SSIRIKGSGG TGSTESSLVT
FLVTSANGQP TAQQQVDFSL DTVIGGLTFA NALANQPSKA SSITNANGLA TVRIQAGTVP
TPVRVTATAT DKDTNEIITS QSEQLTVNTG LPQQLGFSIA ASTFNPEAAA YNGEKVTITI
YASDSFGNPA PDDTTVNFTA EGGQIEPSCL TNNGSCFVTW TSTAPRVSDH RITILAYALG
HETFFDTNGN NQFDAADGGA ITHACVNSNN LAVACTGNGM DIETYHNSGF SDLGDAFRDD
NETGVYEAGK PYFNAQAKTA YSGPDGKFNG PQCTGSLCGT GQANKTYIRK ALVLTMSGSQ
ANFIIKQDGV VINDFNTDIR PIPAAGRSHF SVQLFDSANQ ILPAQTTLDV EASEGDAIFN
GHTVPNTTRA GGTNTEFTLV NTATGTSTVT LTVTTPKGVA TQLTFNVPLL
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