Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3065 |
Symbol | |
ID | 4019591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3681133 |
End bp | 3682233 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637957117 |
Product | PepSY-associated TM helix |
Protein accession | YP_564066 |
Protein GI | 91794415 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.5229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA AATTATTTAA ATGGCACTCC TACACCGCCC TTATCACCCT GCTGCCGTTA TTGATAATCT CAATCACTGG CAGCATTTTA GTATTTAAAG TTGAGTTAGA TAGCCTGCTA AGACCTGCGC ACATGTTAGT TAACGCTGCG CCAGATGCTG CGCGGGTTAG TCTAGACAGC ATGATGAGCA AAGTGCTTAC ACAAAACATC GAATTTGAAC TGGGAGGATG GGAGCTATTT GATAATCACA GCCGCTCAGA TGCGGCTTAC CTCATAAAAC GTGGTACAGA AGAATGGTAT AAAGTTTATA TTAATCAATA TACTGGTGAG CTGCTATCCC AGCCGTACAT CATGGGGCAT TATCTCACCG ACTGGCTGCT TGAGCTGCAT TACACCTTTT TGCTTCACCT GGTTGGTACT AGCTTCGGCT TTGTGATGGC CTTGATTATG CTTTTTTTGG GGATAAGCGG CATCATCTTA TATAAAAAGT TTTGGTCTAA ACTGCTCACT TTTAGAATAA AAGCCGCAAC TCGTATGCTA CTCAGTGATA TTCATAAATT TACCGGTATC ACCAGCTCAC CTATGTTGAT TGTCATTGCT GCAACTGGAG CCTACTGGAA CATCGCCAGC ATCTTACATG AGGTCGATGA GCACCCAAGA GGGGGGCATG TATTCATTGA GCAGCCATTA CATGCTGCGC AGATTTCTTT TGAATCACTT AAGATCCAAG CTGAAACTCA CATCCCAAGT TTTCAGGCAG GTTACCTTGC CATGCCACAC AAAAAAGATT TAGATATCGT CTTCTATGGT GACGTTGATA GTCACAACCC ACTCCATAGC GAATACGCCA GCACAGTCGG TTTTGATAAA CTCACAGGCG AACTCATTTA TGAACAAGAT ATTCGCCAGG CTAGCATACT CATGGTGTTT TTAGACAGTT TTAGAAAACT TCACTTTGGC TATTTTGGCG GCCTTCTCAG CCGTGTTCTT TGGTGCATGG TTGGACTCAT GCCTTTGATA TTAGGCCTGA CTGGGATTTA TATGTATGCC CTGCGGCAAA AACTAGCCAT ATTCCCATTA AGAACCCCAA AGCCTGCTTA A
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Protein sequence | MRKKLFKWHS YTALITLLPL LIISITGSIL VFKVELDSLL RPAHMLVNAA PDAARVSLDS MMSKVLTQNI EFELGGWELF DNHSRSDAAY LIKRGTEEWY KVYINQYTGE LLSQPYIMGH YLTDWLLELH YTFLLHLVGT SFGFVMALIM LFLGISGIIL YKKFWSKLLT FRIKAATRML LSDIHKFTGI TSSPMLIVIA ATGAYWNIAS ILHEVDEHPR GGHVFIEQPL HAAQISFESL KIQAETHIPS FQAGYLAMPH KKDLDIVFYG DVDSHNPLHS EYASTVGFDK LTGELIYEQD IRQASILMVF LDSFRKLHFG YFGGLLSRVL WCMVGLMPLI LGLTGIYMYA LRQKLAIFPL RTPKPA
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