| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2961 |
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| Symbol | |
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| ID | 4019486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 3544142 |
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| End bp | 3544756 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637957012 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_563962 |
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| Protein GI | 91794311 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0857681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATATTT CCCATACTGG TCATGGTTTC ATTAATCACT TTATTAGTGC TTTGGCTCTT
TTGGGTCTCT TCATAAGCGC AGCAGCCCTT GCTATTCCTG CATCCCCCAA GCTCTCAACC
CCAGTAGTCA TACCCTATTG CATTGATCCA AATTGGCTTC CCTATGAAGC AATCATTAAT
GGGAAACATG TTGGTATCTC AGCTGATTAC TTACAGTTAG TCGCACATAA AACTGGCTAT
AAATTTGAGC TGGTTGTCAC TGATGATTGG CCTCAAACCT TGGCCTATTT ACAGCAAGGT
AAATGCGGTA TGACCCCGTT CCTTAATAAG ACGTCAGACA GGGAGCGATT CTTACTCTTC
AGTGATATTT ATTTTGAAGC TCCCAATGTA TTAGTGTCAC TAAAGTCACA GCCCTTTTTA
CAAGGTTTTG AGAATATCGG TGATAGAAGT TTAGCCATAC CAGCAGGGTA TCAATTAGTT
GAATATGTTC AGCGCCATTA CCCACAGGTT AAGTTAATCC TTGTTGATAA TGAGAAAGAA
GGCTTAGAGA GAGTAGCTCA GGGTGATGTG GATGTTTTTG TAGGTTCCAT GCTGTCAGTT
AACACTTACA TCTAG
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| Protein sequence | MNISHTGHGF INHFISALAL LGLFISAAAL AIPASPKLST PVVIPYCIDP NWLPYEAIIN
GKHVGISADY LQLVAHKTGY KFELVVTDDW PQTLAYLQQG KCGMTPFLNK TSDRERFLLF
SDIYFEAPNV LVSLKSQPFL QGFENIGDRS LAIPAGYQLV EYVQRHYPQV KLILVDNEKE
GLERVAQGDV DVFVGSMLSV NTYI
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