Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2924 |
Symbol | |
ID | 4019449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3491527 |
End bp | 3492288 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956975 |
Product | hypothetical protein |
Protein accession | YP_563925 |
Protein GI | 91794274 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000395261 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTATACAG AAACTCAAAA TGATATCACA CGCTTAGTCG TACGCACTGC GCAATTACTG TTAGCCTACG GCGCTGAATC TGAGCTGATT GAAGAGATCA GCCAGCGCCT AGGCAAAGCC TTAGGCCTTG ACAGTGTCGA GTTATCCCTT TCCTCAAATT CCTTAGTGCT CACTAGCCTA GTTCATGGCA CTTGCATAAC GACTACGCGC CGAATTCGCG ATCATGGTTT AAATATGATG ATCATCTGTG AATTACAGCG TATCTGCATC CTGGCAGAGA AGGGCATCTA TGGCCCTGAT GAAGTACGCC GCCGCTTAGC CCGTATCAGC CCTAAAACCT ATCCGGCTAA GCTTGTCGTG CCCATGATAG GTTTATCTTG CGCCAGTTTT TGTCATCTAT TTGGTGGCGA CTTAATTGCC AGTCTGATCA CCTTTGCAGC CTCTGCGATG GGTATGACGG TACGCCTGAA TTTGGCCAAG GGGCATTTTA ATCTTTTAGT CAATTTTTCC GTGACCGCTT TTATTACCAC CATGATAGCC CAAAGTGGCT ACCTTATTCC GCTGACTCAA ACGCCTGAGA TAGCCATGGG AGCTTGTGTA CTAATGTTAG TGCCAGGTTT TCCACTCATC AACGCTATAT CTGATATGGT TAAAGGCCAT ATGGCGGTCG GTATTTCTCG CTGGGCTTAT GCGAGCCTAC TTACCTTGGC ATCAGTCATA GGAATTAGCA TTGCTATGCA GCTAGGAGGC TTATTCCTCT AA
|
Protein sequence | MYTETQNDIT RLVVRTAQLL LAYGAESELI EEISQRLGKA LGLDSVELSL SSNSLVLTSL VHGTCITTTR RIRDHGLNMM IICELQRICI LAEKGIYGPD EVRRRLARIS PKTYPAKLVV PMIGLSCASF CHLFGGDLIA SLITFAASAM GMTVRLNLAK GHFNLLVNFS VTAFITTMIA QSGYLIPLTQ TPEIAMGACV LMLVPGFPLI NAISDMVKGH MAVGISRWAY ASLLTLASVI GISIAMQLGG LFL
|
| |