| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2914 |
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| Symbol | |
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| ID | 4019439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3477807 |
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| End bp | 3478412 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956965 |
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| Product | hypothetical protein |
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| Protein accession | YP_563915 |
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| Protein GI | 91794264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000421511 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATAA CTATGAAACA GTTAAAAATT ATTTTTGTAT TAGCCGCTGT CATGGGCCTG
AGTGCCTGTC AATCTAAGGT TGAATATGGC GATGCCACTG AAGTAGAAAC CGTCAACGAA
AACTTTGGCT CTACCGACTT ACAAGCCATA GCCGCCAAGA TGGTCGACAG CATGATGGTG
TTCCCCCCTG TGATGTCCAT TACCGATACC GGCCGCCCCA TCATCTTTGT GGATAAGATT
AAAAACAAGA CCTCTGAGCA TATCGACACA GAATCAGTCA CAGACACAAT AAGCAACAAG
TTGCTTCGCT CAGGCAAGTT CCGCTTTATC GATATGACCA AAGTCGACGC CGTACGTAAG
CAACTGGATT ACCAAAACAA TGCAGGCATG GTTGACCCAA GCACGGCCAT CAAATTTGGT
CGTCAGATTG GTGCCCAGTT CATGCTTTAT GGCAACTTAT CTAGCATAGT TAAGCAAGAT
GGCAGCACTA AAGACGTGTA TTACAAGATG ACCATGCGCC TAATGGACTT ACAAACAGGC
TTGATTGAGT GGTCCGATGA AAAAGAAATC AGAAAAACGA GATCTAAGTC TTTCTTAGGA
TTATAA
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| Protein sequence | MEITMKQLKI IFVLAAVMGL SACQSKVEYG DATEVETVNE NFGSTDLQAI AAKMVDSMMV
FPPVMSITDT GRPIIFVDKI KNKTSEHIDT ESVTDTISNK LLRSGKFRFI DMTKVDAVRK
QLDYQNNAGM VDPSTAIKFG RQIGAQFMLY GNLSSIVKQD GSTKDVYYKM TMRLMDLQTG
LIEWSDEKEI RKTRSKSFLG L
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