| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2871 |
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| Symbol | |
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| ID | 4019396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3431089 |
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| End bp | 3431946 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956923 |
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| Product | hypothetical protein |
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| Protein accession | YP_563873 |
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| Protein GI | 91794222 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAAC AATTACTCTT ATGCACTGCC GCCCTACTCC TAGGCAGCGC TTTTTCTCAC
TCCTTGCAGG CAAACCTGTT GGTGACCCCA ACTAGGGTGG AGCTGGATGA TAAGCGCGCC
AAAAGTGCAG TATTCTCCTT GGTTAACAAG GGCACTAGCA CCTCACGCTA TGAAGTGTAT
TTCGAAGAGA AGCGCATGCT ACCCAGTGGT GAGTTTGCAA CCTTAGGTAA AAATGGCGGA
TTAGAAGAAA CTAAGCTTGT CGCTGACGAG GCGCTCACTT CACAGATGCA GGCGACTTCC
ATCGCCAAAT ATCTACGCTA CTCCCCAAGA AGAATGACCT TAGAGCCGGA GCAAGGTGGC
CGGGTTCGTT TAGCCCTTCG AGCACCTAAA GACTTACCTG AGGGCGAGTA CCGCAGCTAT
ATCGTGTTTC ACCAAATCCC CTTAGCCCCA AAAGCCCTGA ATACTGATGC TAACAAGGAC
AACCAATCGT TAAGCTTAAC GATTTCGGCT TATATGAAAA TTGCCATTCC GGTCTTTTTA
CGTGTGGGTG ACTTAAAAGC CGATATCAGC CTAAACACAG GGAAACTCGA GCTGTCACAA
GGCGAGCAAA GCCTGCAGGT GACTTTGCAC AGGCAAGGGG CGCGCTCTAG CTATGGTAGC
TTAGACATCA TCAATGCTGT GGATAATCAA GTGCTAGGCT CATTAAAAAA CGCCGCTGTA
TATCACGAGC TCAATGAAAA GTCTTATACC GTCCCCTTAA GCAACACTGT CTTGCCCGGC
AGTGAATTGA TCATTCGTTA CACTGAGAAT GATAGCTTAT TTGACTCTCA AAGCATTGAA
ACTCGGCTCC GCTTTTAA
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| Protein sequence | MNKQLLLCTA ALLLGSAFSH SLQANLLVTP TRVELDDKRA KSAVFSLVNK GTSTSRYEVY
FEEKRMLPSG EFATLGKNGG LEETKLVADE ALTSQMQATS IAKYLRYSPR RMTLEPEQGG
RVRLALRAPK DLPEGEYRSY IVFHQIPLAP KALNTDANKD NQSLSLTISA YMKIAIPVFL
RVGDLKADIS LNTGKLELSQ GEQSLQVTLH RQGARSSYGS LDIINAVDNQ VLGSLKNAAV
YHELNEKSYT VPLSNTVLPG SELIIRYTEN DSLFDSQSIE TRLRF
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