| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2818 |
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| Symbol | |
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| ID | 4019337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3365695 |
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| End bp | 3366714 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956864 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | YP_563820 |
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| Protein GI | 91794169 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0185554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGT TCGAAGGTTC GCACATCCTC TCGGTAAGCC AGTTAGATCT CGACGCTATC
AACACCATAT TTGCCACTGC TAATAATATG ACACCCTACG CCCTGCGAGA AAAACGCACT
AAGGTGTTAG AAGGTGCGAT CTTAGGTAAC CTGTTTTTTG AACCCAGCAC TCGTACTCGA
GTGAGTTTCG GCTGTGCCTT TAACTTGTTA GGCGGCCATG TCAGAGAAAC CACGGGAATG
GCTTCATCGT CCTTGTCTAA GGGTGAATCC TTATACGACA CAGCCCGAGT GTTATCGACC
TATTCCGATG TGATTGCCAT GCGTCATCCC GATGCCTACT CGGTAAAAGA ATTTGCCGAA
GGCAGCCGAG TACCTGTGAT TAATGGCGGC GATGGCCCTA ACGAGCATCC AACCCAAGCC
TTATTAGATT TATTTACCAT TCAAAAAGAA CTTAGCCATT CTGGCATGGG GATCGATGGC
ATGCATATCG CCATGGTGGG CGATCTCAAA TATGGCCGCA CAGTACATTC ACTGTCACGC
CTGTTATGCA TGTATAAAAA CATTCAATTT ACTTTGATCT CCCCAACAGA GCTGTCTATG
CCAGATTATG TGCTCAATGA CATAGAAAAT GCCGGTCACA AGGTACACAT TACCGATAAA
CTGGAAGGCA ATTTGCATCA GGCCGATATC CTCTACTTAA CCCGTATTCA AGAAGAACGC
TTTCCCTCTC AGGAAGAAGC CAACAAATAT CGCGGCAAGT TTAGGTTAAA CCACAGCATT
TATACCCAGC ACTGTAAGTC TCACACTGTG ATCATGCATC CCTTGCCAAG AGACTCGCGG
GAACAGGCCA ATGAGTTAGA TAATGACCTC AATAGCCACC CCAGTTTAGC CATTTTCAGA
CAGGCAGATA ATGGCCTGTT GATCCGTATG GCCCTGTTCG CATTAACCCT AGGGGTTGAA
GATAAACTTA AGCAATACGA GTGTCCGGTG AATTGGTATT CCCGCAAAGG CGATAGATAA
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| Protein sequence | MTQFEGSHIL SVSQLDLDAI NTIFATANNM TPYALREKRT KVLEGAILGN LFFEPSTRTR
VSFGCAFNLL GGHVRETTGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DAYSVKEFAE
GSRVPVINGG DGPNEHPTQA LLDLFTIQKE LSHSGMGIDG MHIAMVGDLK YGRTVHSLSR
LLCMYKNIQF TLISPTELSM PDYVLNDIEN AGHKVHITDK LEGNLHQADI LYLTRIQEER
FPSQEEANKY RGKFRLNHSI YTQHCKSHTV IMHPLPRDSR EQANELDNDL NSHPSLAIFR
QADNGLLIRM ALFALTLGVE DKLKQYECPV NWYSRKGDR
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