Gene Sden_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2817 
Symbol 
ID4019336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp3363831 
End bp3365555 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content50% 
IMG OID637956863 
ProductCl- channel, voltage gated 
Protein accessionYP_563819 
Protein GI91794168 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.174433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATTGA AGATAAATAG AGCCGCTATT ATTCACGCCA AACGCGCTAT ACGCAAATAT 
CTGCGTAATG AGTTTAGGGA TCAACTGTCC CAGGCGAGCA TAAGTGTGCA ATTGTGCGCA
CTGGCTTTAT TGTTTGCCAT CATCTCCTCT GCCGTGATTA TTCTCTTTCG CCTTATGCTG
TTATGGGCCG AGCAGTATAC CCAAGTCCAT ACCGGCACAG TCACTGAACT TGCCTATGAC
TGGCGCACTT ACTTGCCCAT AGCCGGTGCT GCACTCATTT GGTTGGTGGC CTTGTTGGGG
TCAAAGCGCT ATCGACGCAT GGGTATCGCC TATGTGTTAC ACAGATTTAG GCACCACTAT
GGCAAGGTGC CATTGCAATC GGCGCCAGGG CAATTCTTTC AGGCGTTAAT CGCCCTTGTG
ACCAATTTCT CAGTCGGCCG AGAAGGCCCT GCCATTCATT TAGGGGCTGT GAGTGCCAGC
GTCATGGCTG AAAAATTTAA ACTGCCCGAT AACAGCGTGC GCATCATGTG TGCAAGTGGC
ATAGCTGCCG GTATTGCCGC CACCTTTAAC GCGCCATTAG CCGCCGTGTT GTTCGTGTTT
GAAGTCATAG TGCGGGAATA CAAAATTCAT TACTTTTTCC CTATTATGTT GTCCGCCATT
TGCGGCGCGG TATCTAGCCA GCTGGTGTTT GGTAATGTGC ACGAATACGC CGCCATCGAT
GTTATACATA TTCCACTGGA TCATTACCCT ATTTTACTCT TAGGGGGGTT AGCCTTAGGT
TGCACCGCCG CCGCGTTTAA CTATTCTCTG CTCAAGGTGA CCGCCAAGGG CCAACACTGG
CCGCTGATTT ACCGCCTTGC CATTGCCGCA AGCATCACCA CAGTGGTGGG GCTATTTCTG
CCGCAAGCCT TAGGCTCGGG AGATTTAGCC CTCCATGAAG CTGTCAGTGA GAACCCAAGC
TTATTCTTCT TGATAGCCTT ATTGATTGGC AAGATGTTGG CCACTATAGC CGCAATTGGG
TTTGGCGTGC CAGGGGGCCT TATTGGTCCC CTCTATGGTA TTGGCGCCTT GGTCGGTGCC
ATATTAGCGT TAGTCAGTAG CGCGCTGTTT CCCTCTATTG CGCCTTATGT GGGCCTGTAT
ACTGTCATCG GCATGACAGC CATGATGGGG GTCTGTTTAA GCGCCCCCCT TGCCGCCTTA
GTCGCTTTGC TGGAAATGAC CAATGATGCG TCCATCATAC TGCCAGCCAT GTTCGTGACT
ATTCCCGCGT TTTTGATTGC CTATCAATGG TTTAATGCAG AATCCATTTT TTTAAAGCAG
CTTGATATCA TGGGGTTGAG TTACAAGGTA CCGCCAATGA ATTTAGGCCT GCAGCAAAAA
GGCGTGCGGG TGTTAATGGA TAAACGCTTT GTGATAGTCA CCGATGACGG CGACTTACTG
CTGGAAGTAT TAAAACGCGC CGAAGGCAGG CCAGTACTCG TGAGAAATAC CGATGGCAAA
ATAGAAATGC TGCGCCTTGA AATGCAATCA TTTGAAGACA GCACCACACT GTCACGCCAC
CCCATGCAAG GCTTGCCAGA CAGTGCCACC TTAGATGATG CTTATGTGTT ATTGGCGGCA
AAACGTGGCG GTGAAGTGTT TATTTATCGG GACAATATTG ACAGAATTGT CGGAGTAATT
AGCTGGAGTA ATTTGCAACA GGAGATCCGT TTAGGGCAAA TGTGA
 
Protein sequence
MQLKINRAAI IHAKRAIRKY LRNEFRDQLS QASISVQLCA LALLFAIISS AVIILFRLML 
LWAEQYTQVH TGTVTELAYD WRTYLPIAGA ALIWLVALLG SKRYRRMGIA YVLHRFRHHY
GKVPLQSAPG QFFQALIALV TNFSVGREGP AIHLGAVSAS VMAEKFKLPD NSVRIMCASG
IAAGIAATFN APLAAVLFVF EVIVREYKIH YFFPIMLSAI CGAVSSQLVF GNVHEYAAID
VIHIPLDHYP ILLLGGLALG CTAAAFNYSL LKVTAKGQHW PLIYRLAIAA SITTVVGLFL
PQALGSGDLA LHEAVSENPS LFFLIALLIG KMLATIAAIG FGVPGGLIGP LYGIGALVGA
ILALVSSALF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT
IPAFLIAYQW FNAESIFLKQ LDIMGLSYKV PPMNLGLQQK GVRVLMDKRF VIVTDDGDLL
LEVLKRAEGR PVLVRNTDGK IEMLRLEMQS FEDSTTLSRH PMQGLPDSAT LDDAYVLLAA
KRGGEVFIYR DNIDRIVGVI SWSNLQQEIR LGQM