Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2817 |
Symbol | |
ID | 4019336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 3363831 |
End bp | 3365555 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637956863 |
Product | Cl- channel, voltage gated |
Protein accession | YP_563819 |
Protein GI | 91794168 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.174433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATTGA AGATAAATAG AGCCGCTATT ATTCACGCCA AACGCGCTAT ACGCAAATAT CTGCGTAATG AGTTTAGGGA TCAACTGTCC CAGGCGAGCA TAAGTGTGCA ATTGTGCGCA CTGGCTTTAT TGTTTGCCAT CATCTCCTCT GCCGTGATTA TTCTCTTTCG CCTTATGCTG TTATGGGCCG AGCAGTATAC CCAAGTCCAT ACCGGCACAG TCACTGAACT TGCCTATGAC TGGCGCACTT ACTTGCCCAT AGCCGGTGCT GCACTCATTT GGTTGGTGGC CTTGTTGGGG TCAAAGCGCT ATCGACGCAT GGGTATCGCC TATGTGTTAC ACAGATTTAG GCACCACTAT GGCAAGGTGC CATTGCAATC GGCGCCAGGG CAATTCTTTC AGGCGTTAAT CGCCCTTGTG ACCAATTTCT CAGTCGGCCG AGAAGGCCCT GCCATTCATT TAGGGGCTGT GAGTGCCAGC GTCATGGCTG AAAAATTTAA ACTGCCCGAT AACAGCGTGC GCATCATGTG TGCAAGTGGC ATAGCTGCCG GTATTGCCGC CACCTTTAAC GCGCCATTAG CCGCCGTGTT GTTCGTGTTT GAAGTCATAG TGCGGGAATA CAAAATTCAT TACTTTTTCC CTATTATGTT GTCCGCCATT TGCGGCGCGG TATCTAGCCA GCTGGTGTTT GGTAATGTGC ACGAATACGC CGCCATCGAT GTTATACATA TTCCACTGGA TCATTACCCT ATTTTACTCT TAGGGGGGTT AGCCTTAGGT TGCACCGCCG CCGCGTTTAA CTATTCTCTG CTCAAGGTGA CCGCCAAGGG CCAACACTGG CCGCTGATTT ACCGCCTTGC CATTGCCGCA AGCATCACCA CAGTGGTGGG GCTATTTCTG CCGCAAGCCT TAGGCTCGGG AGATTTAGCC CTCCATGAAG CTGTCAGTGA GAACCCAAGC TTATTCTTCT TGATAGCCTT ATTGATTGGC AAGATGTTGG CCACTATAGC CGCAATTGGG TTTGGCGTGC CAGGGGGCCT TATTGGTCCC CTCTATGGTA TTGGCGCCTT GGTCGGTGCC ATATTAGCGT TAGTCAGTAG CGCGCTGTTT CCCTCTATTG CGCCTTATGT GGGCCTGTAT ACTGTCATCG GCATGACAGC CATGATGGGG GTCTGTTTAA GCGCCCCCCT TGCCGCCTTA GTCGCTTTGC TGGAAATGAC CAATGATGCG TCCATCATAC TGCCAGCCAT GTTCGTGACT ATTCCCGCGT TTTTGATTGC CTATCAATGG TTTAATGCAG AATCCATTTT TTTAAAGCAG CTTGATATCA TGGGGTTGAG TTACAAGGTA CCGCCAATGA ATTTAGGCCT GCAGCAAAAA GGCGTGCGGG TGTTAATGGA TAAACGCTTT GTGATAGTCA CCGATGACGG CGACTTACTG CTGGAAGTAT TAAAACGCGC CGAAGGCAGG CCAGTACTCG TGAGAAATAC CGATGGCAAA ATAGAAATGC TGCGCCTTGA AATGCAATCA TTTGAAGACA GCACCACACT GTCACGCCAC CCCATGCAAG GCTTGCCAGA CAGTGCCACC TTAGATGATG CTTATGTGTT ATTGGCGGCA AAACGTGGCG GTGAAGTGTT TATTTATCGG GACAATATTG ACAGAATTGT CGGAGTAATT AGCTGGAGTA ATTTGCAACA GGAGATCCGT TTAGGGCAAA TGTGA
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Protein sequence | MQLKINRAAI IHAKRAIRKY LRNEFRDQLS QASISVQLCA LALLFAIISS AVIILFRLML LWAEQYTQVH TGTVTELAYD WRTYLPIAGA ALIWLVALLG SKRYRRMGIA YVLHRFRHHY GKVPLQSAPG QFFQALIALV TNFSVGREGP AIHLGAVSAS VMAEKFKLPD NSVRIMCASG IAAGIAATFN APLAAVLFVF EVIVREYKIH YFFPIMLSAI CGAVSSQLVF GNVHEYAAID VIHIPLDHYP ILLLGGLALG CTAAAFNYSL LKVTAKGQHW PLIYRLAIAA SITTVVGLFL PQALGSGDLA LHEAVSENPS LFFLIALLIG KMLATIAAIG FGVPGGLIGP LYGIGALVGA ILALVSSALF PSIAPYVGLY TVIGMTAMMG VCLSAPLAAL VALLEMTNDA SIILPAMFVT IPAFLIAYQW FNAESIFLKQ LDIMGLSYKV PPMNLGLQQK GVRVLMDKRF VIVTDDGDLL LEVLKRAEGR PVLVRNTDGK IEMLRLEMQS FEDSTTLSRH PMQGLPDSAT LDDAYVLLAA KRGGEVFIYR DNIDRIVGVI SWSNLQQEIR LGQM
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