Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2755 |
Symbol | |
ID | 4019274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3296928 |
End bp | 3298301 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637956801 |
Product | signal recognition particle protein |
Protein accession | YP_563757 |
Protein GI | 91794106 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000103773 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAGA ATCTAACCGA CAGACTGTCG CGGACCCTAA AGAACATTAG TGGTCGTGGT CGCTTAACTG ACGACAACAT TAAAGAAACC CTACGAGAAG TGCGCATGGC GCTGCTCGAG GCTGACGTTG CTCTGCCAGT TGTCAGAGAA TTCGTTAATA GCGTGAAAGA GCGCGCCGTT GGCCAAGAAG TATCTAAAAG CTTAAGTCCG GGTCAAGCCT TCATTAAAAT CGTTCAGAGT GAGCTTGAAA AAGCCATGGG CGAGTCTAAT GAAGCATTAG ATTTAGCGGC AATACCGCCA GCTGTGATCA TGATGGCTGG TCTGCAGGGG GCGGGTAAAA CCACCTCTGT GGCCAAACTG GGTAAATTAC TGCGCACTCG CCATAAGAAA TCAGTACTTG TGGTCAGCGC CGACGTGTAT CGCCCCGCGG CAATTAAACA GCTTGAAACC TTAGCCGCAG AAGTCGAGGT CGAATTTTTC CCATCGGATG TCAGCCAGAA GCCGCTCGAT ATCGCCAAGG CTGCCATTGC ACATGCCAAG CTTAAGTTCA TCGATGTGGT AATTGTCGAT ACAGCAGGTC GCCTGCATGT CGATGAAGCC ATGATGGATG AAATCAAGCA GCTACACGCC AGCATTAATC CGGTTGAGAC CTTATTTGTG GTCGATGCCA TGACAGGTCA AGATGCGGCC AATACGGCTA AAGCCTTCAA CGAAGCCTTG CCTTTAACCG GCGTTATCTT AACTAAGGTT GACGGCGATG CTCGCGGCGG CGCGGCGTTA TCTATCCGTA ATATCACTGG TAAGCCGATT AAGTTCTTAG GTGTGGGCGA AAAGACTGAT GCCCTAGAGC CTTTTCATCC TGATCGCATC GCATCACGCA TTTTGGGTAT GGGTGATGTG CTGTCACTGA TAGAAGAAGT GGAGCGCGGT GTCGATAAAG ACAAAGCGAT GAAGCTGGCC TCTAAGGTGA AGTCTGGCGG TAGCTTCGAT TTAGAAGATT TCCGCGAGCA GCTGCAGCAA ATGAAAAACA TGGGCGGCAT GATGAACATG ATTGAAAAGC TGCCTGGTGT AGGCCAGTTG CCCCCAGAAG CCTTAGCCCA AGTCCAAGAC GGCAAGATGA CAGGTCAAAT GGAAGCCATT ATTAACTCCA TGACGGCCAA GGAACGTAAA AACCCAGATT TAATCAAAGG CTCACGCAAA CGCCGTATCG CCTTAGGTTC TGGCACGCAA ATTCAAGATG TGAATCGTCT ACTTAAGCAG TTTACACAGA TGCAAAAGAT GATGAAGAAG ATGTCGGCTA AAGGCGGCAT GAAGAAGATG ATGCGCGGCA TGAGCGGCAT GATGCCACCA GGAATGAAAT TCCCAGGGCG TTAA
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Protein sequence | MFENLTDRLS RTLKNISGRG RLTDDNIKET LREVRMALLE ADVALPVVRE FVNSVKERAV GQEVSKSLSP GQAFIKIVQS ELEKAMGESN EALDLAAIPP AVIMMAGLQG AGKTTSVAKL GKLLRTRHKK SVLVVSADVY RPAAIKQLET LAAEVEVEFF PSDVSQKPLD IAKAAIAHAK LKFIDVVIVD TAGRLHVDEA MMDEIKQLHA SINPVETLFV VDAMTGQDAA NTAKAFNEAL PLTGVILTKV DGDARGGAAL SIRNITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV LSLIEEVERG VDKDKAMKLA SKVKSGGSFD LEDFREQLQQ MKNMGGMMNM IEKLPGVGQL PPEALAQVQD GKMTGQMEAI INSMTAKERK NPDLIKGSRK RRIALGSGTQ IQDVNRLLKQ FTQMQKMMKK MSAKGGMKKM MRGMSGMMPP GMKFPGR
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