Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2656 |
Symbol | |
ID | 4019173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 3187472 |
End bp | 3188572 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637956700 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_563658 |
Protein GI | 91794007 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGAA GTATTTATAA TGGGAAAAAA GTCTTAATTA CTGGACATAC AGGTTTTAAA GGAACCTGGT TAACAGCTTG GTTGCTTGAG CTCGGTGCAG AGGTTTGTGG TTTATCAATT GATATTCCAA CAAAACCATC GATGTTTGAA GAACTAGAAC TTGAAAAGAA AATTACACAT CATATTGCCG ATATACGTGA TTTAAATACT ATAACAAAAA TCATTACTGA TTTTAAACCT GATTTTCTTT TTCATCTAGC AGCTCAGCCG ATAGTATCTT TATCTTATAG TAACCCTTTA GAGACTATTT CAACGAATGT AATGGGAACT GCTAATGTCC TTGAGGTTCT TCGAAAGTTT ACGCATAAAT GTTACGCAGT AATTATTACT AGTGATAAGT GCTATGAAAA CGTTGAATGG GTCTGGGGAT ATAAAGAGAC TGACGCTGTT GGTGGTCGTG ACATTTATAG TGGTTCAAAA GGTGCTGCTG AAGTTATTTT CCATGCTTAT CAACAATCAT TTTTTCCAAC GGCTGATGAT AATGTAAGAG TAGCGACAGG CAGAGCTGGT AATGTTATTG GTGGTGGAGA TTGGGCGCCT GATCGAATTG TCGCTGATTG TATGCGAGCT TGGAATAAAA ATCTCCAGGT CGAAATTAGA TGTCCTGATG CTACAAGACC GTGGCAACAC GTTTTAGAAC CATTAAGTGG TTATTTAGCA CTTGGTCAAG GGCTAGCTTT AGATTCAAAT AACCATGGGC AACAGTACAA TTTTGGCCCA AGATCAGAGC AAAATCATAC AGTCAAAGAT TTGCTTTCTG ATCTAAGTAA ATATTGGTAT TTTAAAAATA CCGATGATGC CTATGTTGTG ACCGACAATA TCCCCTTTCA TGAAGCTGGT TTACTTAAAT TAAACTGTGA TAAGGCTCTA TTTAATTTGA AGTGGGAAGC TAACCTAAAT TATAATCAGT GCATTAAATT TGTGAGTGAG TGGTATTACG AGTTTTATCA GAAAGAAAAA GACATGATGA AATTTACTTC TATGCAAATT AATGAATATC AACGAATAGC TAAAGAAAAA AATATATCAT GGTGTGACTA A
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Protein sequence | MFGSIYNGKK VLITGHTGFK GTWLTAWLLE LGAEVCGLSI DIPTKPSMFE ELELEKKITH HIADIRDLNT ITKIITDFKP DFLFHLAAQP IVSLSYSNPL ETISTNVMGT ANVLEVLRKF THKCYAVIIT SDKCYENVEW VWGYKETDAV GGRDIYSGSK GAAEVIFHAY QQSFFPTADD NVRVATGRAG NVIGGGDWAP DRIVADCMRA WNKNLQVEIR CPDATRPWQH VLEPLSGYLA LGQGLALDSN NHGQQYNFGP RSEQNHTVKD LLSDLSKYWY FKNTDDAYVV TDNIPFHEAG LLKLNCDKAL FNLKWEANLN YNQCIKFVSE WYYEFYQKEK DMMKFTSMQI NEYQRIAKEK NISWCD
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